Variant report

Variant	rs135483
Chromosome Location	chr22:32949312-32949313
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs135123	0.82[ASN][1000 genomes]
rs135474	0.90[ASN][1000 genomes]
rs135476	0.90[ASN][1000 genomes]
rs135478	0.90[ASN][1000 genomes]
rs135480	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2105865	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2213405	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2239766	0.90[ASN][1000 genomes]
rs2251400	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2710380	1.00[ASN][1000 genomes]
rs2858339	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs5749457	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs5754137	0.90[ASN][1000 genomes]
rs5754138	0.90[ASN][1000 genomes]
rs5754139	0.90[ASN][1000 genomes]
rs762909	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609593	1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32943200-32951200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr22:32943200-32959400	Weak transcription	Left Ventricle	heart
3	chr22:32943800-32951000	Weak transcription	Ovary	ovary
4	chr22:32943800-32951200	Weak transcription	Adipose Nuclei	Adipose
5	chr22:32943800-32951200	Weak transcription	Right Atrium	heart
6	chr22:32943800-32953200	Weak transcription	Spleen	Spleen
7	chr22:32948000-32951400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr22:32948800-32951000	Weak transcription	Small Intestine	intestine
9	chr22:32949000-32953200	Weak transcription	Colonic Mucosa	Colon
10	chr22:32949200-32949600	Weak transcription	Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links