Variant report

Variant	rs1355777
Chromosome Location	chr3:133007360-133007361
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1197279	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1197281	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1197284	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1349296	1.00[YRI][hapmap]
rs1513374	0.83[AFR][1000 genomes]
rs3948082	0.98[AFR][1000 genomes]
rs4447761	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4638969	0.93[AFR][1000 genomes]
rs4854575	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs4854578	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9835622	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:132996200-133012200	Weak transcription	HSMM	muscle
2	chr3:132997000-133010800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr3:132997200-133012400	Weak transcription	HSMMtube	muscle
4	chr3:133003200-133008800	Weak transcription	Fetal Brain Female	brain
5	chr3:133003400-133010400	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr3:133003400-133014000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr3:133003400-133015400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:133003600-133011000	Weak transcription	Fetal Brain Male	brain
9	chr3:133003600-133012400	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr3:133003600-133014000	Weak transcription	Right Atrium	heart
11	chr3:133005600-133010600	Weak transcription	Fetal Lung	lung
12	chr3:133006800-133007400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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