The 2.0 version of rSNPBase

Variant report

Variant rs1358997
Chromosome Location chr6:109701660-109701661
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:109684000-109702400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:109684400-109702400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:109690600-109701800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:109693400-109702600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr6:109694400-109701800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:109696800-109702400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr6:109697800-109702400 Weak transcription Esophagus oesophagus
8 chr6:109697800-109702800 Weak transcription Spleen Spleen
9 chr6:109698400-109702400 Weak transcription Lung lung
10 chr6:109699400-109702400 Weak transcription Gastric stomach
11 chr6:109699400-109702600 Flanking Active TSS Primary hematopoietic stem cells blood
12 chr6:109699600-109702400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:109699600-109702400 Weak transcription Pancreas Pancrea
14 chr6:109699800-109702400 Transcr. at gene 5' and 3' K562 blood
15 chr6:109700200-109701800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
16 chr6:109700200-109701800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
17 chr6:109700200-109702000 Flanking Active TSS Brain Angular Gyrus brain
18 chr6:109700200-109702400 Flanking Active TSS Primary T cells from cord blood blood
19 chr6:109700200-109705600 Active TSS Stomach Smooth Muscle stomach
20 chr6:109700400-109701800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
21 chr6:109700400-109702000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:109700400-109702200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
23 chr6:109700400-109702200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
24 chr6:109700400-109705200 Active TSS Right Ventricle heart
25 chr6:109700600-109701800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr6:109700600-109701800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:109700600-109702000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
28 chr6:109700600-109702000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr6:109700600-109702000 Flanking Active TSS Liver Liver
30 chr6:109700600-109702000 Flanking Active TSS NH-A brain
31 chr6:109700600-109702200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr6:109700600-109702200 Flanking Active TSS Primary B cells from cord blood blood
33 chr6:109700600-109703000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:109700600-109703000 Active TSS Right Atrium heart
35 chr6:109700600-109704800 Active TSS Breast Myoepithelial Primary Cells Breast
36 chr6:109700600-109704800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:109700600-109704800 Active TSS Fetal Intestine Small intestine
38 chr6:109700600-109704800 Active TSS Fetal Muscle Leg muscle
39 chr6:109700600-109704800 Active TSS GM12878-XiMat blood
40 chr6:109700600-109705000 Active TSS Left Ventricle heart
41 chr6:109700600-109705800 Active TSS Ovary ovary
42 chr6:109700600-109706000 Active TSS Colonic Mucosa Colon
43 chr6:109700600-109706200 Active TSS Pancreatic Islets Pancreatic Islet
44 chr6:109700800-109701800 Flanking Active TSS Primary monocytes fromperipheralblood blood
45 chr6:109700800-109702000 Flanking Active TSS Brain Germinal Matrix brain
46 chr6:109700800-109702000 Flanking Active TSS HUVEC blood vessel
47 chr6:109700800-109702000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr6:109700800-109702600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr6:109700800-109702800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr6:109700800-109703000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015