Variant report

Variant	rs1367082
Chromosome Location	chr2:167958756-167958757
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10497314	0.89[JPT][hapmap]
rs1346723	0.89[JPT][hapmap];0.83[MKK][hapmap]
rs16852935	0.94[GIH][hapmap];0.82[MEX][hapmap];0.83[AMR][1000 genomes]
rs7557440	0.89[JPT][hapmap]
rs7592671	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs7599374	0.82[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167957400-167958800	Weak transcription	HepG2	liver
2	chr2:167958600-167961000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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