Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:190461683..190463384-chr2:190472162..190475132,2	K562	blood:
2	chr2:190406617..190409295-chr2:190461798..190465835,3	MCF-7	breast:
3	chr2:190461842..190463650-chr2:190477780..190480219,2	MCF-7	breast:
4	chr2:190455804..190458326-chr2:190460988..190463187,2	K562	blood:
5	chr2:190462767..190465403-chr2:190503806..190505859,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10177654	0.95[EUR][1000 genomes]
rs10188680	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs1123110	0.81[MEX][hapmap]
rs11694919	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12465298	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12619013	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13012833	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1347708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1437885	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1439814	0.81[MEX][hapmap]
rs17198983	0.92[CEU][hapmap];0.95[GIH][hapmap];0.81[MEX][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2352267	0.92[CEU][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs2352270	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4666778	0.81[EUR][1000 genomes]
rs6712505	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6718734	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6718798	0.96[CEU][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs6733858	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6741965	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7590106	0.96[CEU][hapmap];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533029	chr2:189812229-190554339	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190462800-190464200	Weak transcription	K562	blood

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