Variant report
Variant | rs1411905 |
---|---|
Chromosome Location | chr6:44289451-44289452 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11571907 | 1.00[ASN][1000 genomes] |
rs11571915 | 1.00[ASN][1000 genomes] |
rs11571917 | 1.00[ASN][1000 genomes] |
rs11571951 | 1.00[ASN][1000 genomes] |
rs11571957 | 1.00[ASN][1000 genomes] |
rs11571998 | 1.00[ASN][1000 genomes] |
rs11572002 | 1.00[ASN][1000 genomes] |
rs11572056 | 1.00[ASN][1000 genomes] |
rs12193699 | 1.00[ASN][1000 genomes] |
rs1293204 | 1.00[ASN][1000 genomes] |
rs1331293 | 1.00[ASN][1000 genomes] |
rs161706 | 1.00[ASN][1000 genomes] |
rs324136 | 0.84[TSI][hapmap];1.00[ASN][1000 genomes] |
rs324143 | 0.84[TSI][hapmap] |
rs325005 | 1.00[ASN][1000 genomes] |
rs325006 | 1.00[ASN][1000 genomes] |
rs325007 | 0.84[TSI][hapmap];1.00[ASN][1000 genomes] |
rs325008 | 0.84[TSI][hapmap];1.00[ASN][1000 genomes] |
rs325009 | 0.84[TSI][hapmap];1.00[ASN][1000 genomes] |
rs4308546 | 1.00[ASN][1000 genomes] |
rs4714778 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs482336 | 1.00[ASN][1000 genomes] |
rs534416 | 1.00[ASN][1000 genomes] |
rs567192 | 1.00[ASN][1000 genomes] |
rs61462867 | 1.00[ASN][1000 genomes] |
rs650075 | 1.00[ASN][1000 genomes] |
rs6927345 | 1.00[ASN][1000 genomes] |
rs7740535 | 0.84[TSI][hapmap];1.00[ASN][1000 genomes] |
rs9369483 | 1.00[ASN][1000 genomes] |
rs9472243 | 1.00[ASN][1000 genomes] |
rs9472244 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv931987 | chr6:43624625-44350167 | Enhancers Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 201 gene(s) | inside rSNPs | diseases |
2 | nsv516456 | chr6:44282316-44298309 | Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:44288000-44289800 | Enhancers | Primary neutrophils fromperipheralblood | blood |