Variant report

Variant	rs1415977
Chromosome Location	chr1:66994004-66994005
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10493409	0.81[YRI][hapmap]
rs12024358	0.83[ASN][1000 genomes]
rs12135213	0.83[ASN][1000 genomes]
rs12749728	0.83[ASN][1000 genomes]
rs1338195	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1338205	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2121052	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2121053	0.83[ASN][1000 genomes]
rs2121054	0.83[ASN][1000 genomes]
rs2197475	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2312150	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35652756	0.82[ASN][1000 genomes]
rs4655615	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7547570	0.82[CHB][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:66988400-66998200	Weak transcription	Osteobl	bone
2	chr1:66990800-66994800	Enhancers	NHLF	lung
3	chr1:66991800-66998600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr1:66992000-66997400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr1:66992600-66995000	Enhancers	HUVEC	blood vessel
6	chr1:66993400-66994600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr1:66993600-66997400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr1:66993600-66997400	Weak transcription	NHDF-Ad	bronchial
9	chr1:66993600-66997600	Weak transcription	Fetal Heart	heart
10	chr1:66993600-66998200	Weak transcription	NHEK	skin
11	chr1:66993800-66994600	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr1:66993800-66995200	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr1:66993800-66998000	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr1:66994000-66998000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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