The 2.0 version of rSNPBase

Variant report

Variant rs35652756
Chromosome Location chr1:67008216-67008217
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67001600-67011000 Weak transcription Stomach Smooth Muscle stomach
5 chr1:67002000-67010600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:67003000-67012400 Enhancers Brain Hippocampus Middle brain
7 chr1:67004200-67009200 Enhancers Brain Cingulate Gyrus brain
8 chr1:67004200-67009600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:67004200-67012200 Enhancers NHDF-Ad bronchial
10 chr1:67004200-67012400 Enhancers Fetal Heart heart
11 chr1:67004800-67012400 Enhancers Brain Substantia Nigra brain
12 chr1:67005000-67008600 Enhancers Brain Inferior Temporal Lobe brain
13 chr1:67005400-67012200 Enhancers Brain Angular Gyrus brain
14 chr1:67005600-67008400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:67005600-67008800 Weak transcription HMEC breast
16 chr1:67005800-67010600 Weak transcription Fetal Brain Female brain
17 chr1:67006000-67011000 Enhancers HUVEC blood vessel
18 chr1:67006400-67011200 Weak transcription Fetal Brain Male brain
19 chr1:67006600-67008400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:67006600-67008800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:67006800-67012000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:67007000-67008400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:67007000-67008800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:67007000-67008800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:67007000-67011400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:67007200-67008400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:67007200-67008600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:67007200-67009200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:67007200-67010600 Weak transcription Aorta Aorta
31 chr1:67007200-67018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:67007800-67012400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr1:67008000-67008400 Enhancers Left Ventricle heart
34 chr1:67008000-67008400 Enhancers Lung lung
35 chr1:67008000-67008400 Flanking Active TSS NHLF lung
36 chr1:67008000-67008600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:67008000-67008600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:67008000-67008600 Enhancers Fetal Kidney kidney
39 chr1:67008000-67009200 Flanking Active TSS HepG2 liver
40 chr1:67008000-67009600 Enhancers Pancreas Pancrea
41 chr1:67008000-67012400 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr1:67008200-67008400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:67008200-67008400 Enhancers Brain Anterior Caudate brain
44 chr1:67008200-67008600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:67008200-67008600 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr1:67008200-67008600 Flanking Active TSS Fetal Lung lung
47 chr1:67008200-67008600 Flanking Active TSS NH-A brain
48 chr1:67008200-67008600 Flanking Active TSS Osteobl bone
49 chr1:67008200-67009000 Enhancers Skeletal Muscle Male skeletal muscle
50 chr1:67008200-67009400 Enhancers Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015