Variant report

Variant	rs7547570
Chromosome Location	chr1:67008495-67008496
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:67008052..67009564-chr1:67023947..67025718,2	K562	blood:

rs_ID	r²[population]
rs11208904	0.81[CHB][hapmap];0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs11208905	0.82[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs12750223	0.87[CHB][hapmap];0.95[JPT][hapmap]
rs1338195	0.82[ASN][1000 genomes]
rs1338205	0.82[ASN][1000 genomes]
rs1415977	0.82[ASN][1000 genomes]
rs2121052	0.82[ASN][1000 genomes]
rs2197475	0.80[ASN][1000 genomes]
rs2312150	0.82[ASN][1000 genomes]
rs35652756	1.00[ASN][1000 genomes]
rs4655615	0.82[ASN][1000 genomes]

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67000400-67022000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:67000800-67029800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr1:67001200-67022000	Weak transcription	Right Ventricle	heart
4	chr1:67001600-67011000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr1:67002000-67010600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr1:67003000-67012400	Enhancers	Brain Hippocampus Middle	brain
7	chr1:67004200-67009200	Enhancers	Brain Cingulate Gyrus	brain
8	chr1:67004200-67009600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr1:67004200-67012200	Enhancers	NHDF-Ad	bronchial
10	chr1:67004200-67012400	Enhancers	Fetal Heart	heart
11	chr1:67004800-67012400	Enhancers	Brain Substantia Nigra	brain
12	chr1:67005000-67008600	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr1:67005400-67012200	Enhancers	Brain Angular Gyrus	brain
14	chr1:67005600-67008800	Weak transcription	HMEC	breast
15	chr1:67005800-67010600	Weak transcription	Fetal Brain Female	brain
16	chr1:67006000-67011000	Enhancers	HUVEC	blood vessel
17	chr1:67006400-67011200	Weak transcription	Fetal Brain Male	brain
18	chr1:67006600-67008800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr1:67006800-67012000	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr1:67007000-67008800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr1:67007000-67008800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr1:67007000-67011400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr1:67007000-67021800	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr1:67007200-67008600	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr1:67007200-67009200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr1:67007200-67010600	Weak transcription	Aorta	Aorta
27	chr1:67007200-67018000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr1:67007800-67012400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
29	chr1:67008000-67008600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr1:67008000-67008600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr1:67008000-67008600	Enhancers	Fetal Kidney	kidney
32	chr1:67008000-67009200	Flanking Active TSS	HepG2	liver
33	chr1:67008000-67009600	Enhancers	Pancreas	Pancrea
34	chr1:67008000-67012400	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr1:67008200-67008600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr1:67008200-67008600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
37	chr1:67008200-67008600	Flanking Active TSS	Fetal Lung	lung
38	chr1:67008200-67008600	Flanking Active TSS	NH-A	brain
39	chr1:67008200-67008600	Flanking Active TSS	Osteobl	bone
40	chr1:67008200-67009000	Enhancers	Skeletal Muscle Male	skeletal muscle
41	chr1:67008200-67009400	Enhancers	Duodenum Smooth Muscle	Duodenum
42	chr1:67008200-67010200	Enhancers	Hela-S3	cervix
43	chr1:67008400-67008600	Flanking Active TSS	Brain Anterior Caudate	brain
44	chr1:67008400-67009000	Enhancers	Fetal Stomach	stomach
45	chr1:67008400-67009200	Weak transcription	Left Ventricle	heart
46	chr1:67008400-67009400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr1:67008400-67009400	Enhancers	Fetal Intestine Large	intestine
48	chr1:67008400-67009600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr1:67008400-67009600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr1:67008400-67009600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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