Variant report
| Variant | rs1427830 |
|---|---|
| Chromosome Location | chr12:21791455-21791456 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:21781200-21796400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 2 | chr12:21781200-21809600 | Weak transcription | Small Intestine | intestine |
| 3 | chr12:21782600-21805400 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr12:21783800-21801600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr12:21784600-21792400 | Strong transcription | Fetal Thymus | thymus |
| 6 | chr12:21785000-21801400 | Strong transcription | Dnd41 | blood |
| 7 | chr12:21785200-21793600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr12:21785200-21798600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr12:21785400-21793600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr12:21785400-21797600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr12:21785400-21805200 | Strong transcription | GM12878-XiMat | blood |
| 12 | chr12:21785600-21794800 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 13 | chr12:21785800-21797000 | Strong transcription | Primary B cells from cord blood | blood |
| 14 | chr12:21785800-21797200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 15 | chr12:21785800-21807600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 16 | chr12:21786000-21793600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 17 | chr12:21786000-21793800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 18 | chr12:21786000-21796200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr12:21786200-21791800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 20 | chr12:21786200-21792000 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 21 | chr12:21786200-21797600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 22 | chr12:21786200-21807000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 23 | chr12:21786400-21795600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 24 | chr12:21786400-21796600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 25 | chr12:21786400-21807800 | Strong transcription | Osteobl | bone |
| 26 | chr12:21786600-21792200 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 27 | chr12:21786800-21791800 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 28 | chr12:21786800-21799200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 29 | chr12:21786800-21805000 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 30 | chr12:21786800-21807400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr12:21787000-21795600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 32 | chr12:21787000-21801400 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 33 | chr12:21787000-21807000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr12:21787000-21807800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr12:21787000-21807800 | Strong transcription | Primary hematopoietic stem cells | blood |
| 36 | chr12:21787200-21791800 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr12:21787200-21792200 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 38 | chr12:21787200-21792200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 39 | chr12:21787200-21793800 | Strong transcription | NHLF | lung |
| 40 | chr12:21787200-21796000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 41 | chr12:21787200-21796200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 42 | chr12:21787200-21796200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 43 | chr12:21787200-21796200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 44 | chr12:21787200-21798400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 45 | chr12:21787200-21806800 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 46 | chr12:21787200-21807400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 47 | chr12:21787200-21807600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr12:21787200-21808200 | Strong transcription | NH-A | brain |
| 49 | chr12:21787200-21808600 | Strong transcription | HMEC | breast |
| 50 | chr12:21787200-21808600 | Strong transcription | HSMM | muscle |
