Variant report
| Variant | rs1677110 |
|---|---|
| Chromosome Location | chr12:21799502-21799503 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:21781200-21809600 | Weak transcription | Small Intestine | intestine |
| 2 | chr12:21782600-21805400 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr12:21783800-21801600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr12:21785000-21801400 | Strong transcription | Dnd41 | blood |
| 5 | chr12:21785400-21805200 | Strong transcription | GM12878-XiMat | blood |
| 6 | chr12:21785800-21807600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 7 | chr12:21786200-21807000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 8 | chr12:21786400-21807800 | Strong transcription | Osteobl | bone |
| 9 | chr12:21786800-21805000 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 10 | chr12:21786800-21807400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr12:21787000-21801400 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 12 | chr12:21787000-21807000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr12:21787000-21807800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 14 | chr12:21787000-21807800 | Strong transcription | Primary hematopoietic stem cells | blood |
| 15 | chr12:21787200-21806800 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 16 | chr12:21787200-21807400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 17 | chr12:21787200-21807600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 18 | chr12:21787200-21808200 | Strong transcription | NH-A | brain |
| 19 | chr12:21787200-21808600 | Strong transcription | HMEC | breast |
| 20 | chr12:21787200-21808600 | Strong transcription | HSMM | muscle |
| 21 | chr12:21787400-21803800 | Strong transcription | HUVEC | blood vessel |
| 22 | chr12:21787800-21801800 | Strong transcription | NHDF-Ad | bronchial |
| 23 | chr12:21788000-21809200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 24 | chr12:21788600-21810000 | Weak transcription | Liver | Liver |
| 25 | chr12:21788800-21801400 | Weak transcription | Right Ventricle | heart |
| 26 | chr12:21788800-21803800 | Weak transcription | Esophagus | oesophagus |
| 27 | chr12:21788800-21803800 | Weak transcription | Pancreas | Pancrea |
| 28 | chr12:21790000-21808200 | Strong transcription | Fetal Muscle Trunk | muscle |
| 29 | chr12:21790200-21806000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 30 | chr12:21791000-21807600 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 31 | chr12:21791600-21807600 | Genic enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 32 | chr12:21791800-21809400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 33 | chr12:21792000-21807200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 34 | chr12:21792400-21807200 | Genic enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 35 | chr12:21792600-21800400 | Strong transcription | Primary B cells from peripheral blood | blood |
| 36 | chr12:21793200-21807800 | Strong transcription | Fetal Thymus | thymus |
| 37 | chr12:21793400-21800400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 38 | chr12:21793400-21805600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr12:21793600-21800200 | Strong transcription | Brain Anterior Caudate | brain |
| 40 | chr12:21793600-21803600 | Genic enhancers | Primary T cells from cord blood | blood |
| 41 | chr12:21793600-21803800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 42 | chr12:21793600-21804000 | Genic enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 43 | chr12:21793600-21804800 | Strong transcription | Thymus | Thymus |
| 44 | chr12:21793600-21805600 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 45 | chr12:21793600-21806200 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 46 | chr12:21793600-21808000 | Strong transcription | Fetal Muscle Leg | muscle |
| 47 | chr12:21793800-21801800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 48 | chr12:21794000-21803600 | Genic enhancers | Primary T helper cells PMA-I stimulated | -- |
| 49 | chr12:21795400-21800400 | Strong transcription | Psoas Muscle | Psoas |
| 50 | chr12:21795600-21799600 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
