Variant report

Variant rs1677074
Chromosome Location chr12:21809807-21809808
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:21788600-21810000 Weak transcription Liver Liver
2 chr12:21804200-21810000 Weak transcription Stomach Mucosa stomach
3 chr12:21804400-21810000 Weak transcription Spleen Spleen
4 chr12:21806000-21810600 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
5 chr12:21807000-21810200 Transcr. at gene 5' and 3' A549 lung
6 chr12:21807600-21811400 Active TSS GM12878-XiMat blood
7 chr12:21807800-21810200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr12:21808000-21810200 Active TSS Right Atrium heart
9 chr12:21808200-21810800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr12:21808200-21811000 Active TSS Primary T cells fromperipheralblood blood
11 chr12:21808200-21811200 Active TSS iPS-15b Cell Line embryonic stem cell
12 chr12:21808200-21811200 Active TSS K562 blood
13 chr12:21808400-21810600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr12:21808400-21811200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr12:21808400-21811200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:21808600-21810800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr12:21808600-21810800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr12:21808600-21810800 Flanking Active TSS Primary hematopoietic stem cells blood
19 chr12:21808600-21810800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
20 chr12:21808600-21811200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr12:21808600-21811200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
22 chr12:21808600-21811200 Active TSS Brain Substantia Nigra brain
23 chr12:21808600-21811200 Active TSS Ovary ovary
24 chr12:21808600-21811200 Active TSS Rectal Mucosa Donor 29 rectum
25 chr12:21808600-21811200 Active TSS Right Ventricle heart
26 chr12:21808600-21811400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
27 chr12:21808600-21811800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr12:21808800-21811200 Active TSS H1 Cell Line embryonic stem cell
29 chr12:21808800-21811200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
30 chr12:21808800-21811200 Active TSS Psoas Muscle Psoas
31 chr12:21808800-21811600 Active TSS Fetal Kidney kidney
32 chr12:21809000-21810400 Flanking Active TSS Primary B cells from cord blood blood
33 chr12:21809000-21810400 Flanking Active TSS Adipose Nuclei Adipose
34 chr12:21809000-21810800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr12:21809000-21810800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
36 chr12:21809000-21811200 Active TSS ES-I3 Cell Line embryonic stem cell
37 chr12:21809000-21811200 Active TSS H9 Cell Line embryonic stem cell
38 chr12:21809000-21811200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
39 chr12:21809000-21811200 Active TSS Primary T helper naive cells fromperipheralblood blood
40 chr12:21809000-21811200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr12:21809000-21811200 Active TSS Fetal Muscle Leg muscle
42 chr12:21809000-21811200 Active TSS Fetal Thymus thymus
43 chr12:21809000-21811600 Active TSS HUES6 Cell Line embryonic stem cell
44 chr12:21809000-21811600 Active TSS Brain Inferior Temporal Lobe brain
45 chr12:21809000-21811800 Active TSS NHLF lung
46 chr12:21809200-21810000 Enhancers Primary neutrophils fromperipheralblood blood
47 chr12:21809200-21810200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr12:21809200-21810200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
49 chr12:21809200-21811200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr12:21809200-21811200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell

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