Variant report

Variant	rs1429434
Chromosome Location	chr16:72698612-72698613
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F6	chr16:72698341-72699424	K562	blood:	n/a	chr16:72699063-72699070 chr16:72699063-72699070 chr16:72699060-72699074 chr16:72699063-72699070 chr16:72699060-72699071
2	POLR2A	chr16:72698393-72699282	GM10847	blood:	n/a	n/a
3	MYC	chr16:72698490-72698658	MCF10A-Er-Src	breast:	n/a	n/a
4	ELF1	chr16:72698465-72699249	GM12878	blood:	n/a	chr16:72699012-72699023 chr16:72699013-72699022
5	POLR2A	chr16:72698401-72699274	GM12878	blood:	n/a	n/a
6	SIN3AK20	chr16:72698448-72699338	HepG2	liver:	n/a	n/a
7	SIN3A	chr16:72698196-72699749	H1-hESC	embryonic stem cell:	n/a	n/a
8	RAD21	chr16:72698490-72698902	HepG2	liver:	n/a	n/a
9	STAT5A	chr16:72698252-72699327	GM12878	blood:	n/a	chr16:72698283-72698291
10	SP1	chr16:72698338-72699226	H1-hESC	embryonic stem cell:	n/a	chr16:72698440-72698453
11	POLR2A	chr16:72698340-72699430	Hela-S3	cervix:	n/a	n/a
12	POLR2A	chr16:72697903-72699325	GM19193	blood:	n/a	n/a
13	BHLHE40	chr16:72698608-72699248	K562	blood:	n/a	n/a
14	TAF1	chr16:72698351-72699311	GM12878	blood:	n/a	n/a
15	PBX3	chr16:72698328-72699307	SK-N-SH	brain:	n/a	chr16:72698906-72698926
16	POLR2A	chr16:72698045-72699364	H1-neurons	neurons:	n/a	n/a
17	POLR2A	chr16:72698390-72699273	H1-hESC	embryonic stem cell:	n/a	n/a
18	TAF1	chr16:72698420-72699417	A549	lung:	n/a	n/a
19	ZC3H11A	chr16:72698568-72698694	K562	blood:	n/a	n/a
20	RAD21	chr16:72698286-72699373	IMR90	lung:	n/a	n/a
21	NFYB	chr16:72698501-72699213	K562	blood:	n/a	chr16:72698915-72698930
22	UBTF	chr16:72698414-72698995	K562	blood:	n/a	n/a
23	EP300	chr16:72698578-72699410	K562	blood:	n/a	n/a
24	MXI1	chr16:72698210-72699645	GM12878	blood:	n/a	chr16:72698998-72699013 chr16:72698996-72699011
25	POLR2A	chr16:72698147-72699356	GM12891	blood:	n/a	n/a
26	HCFC1	chr16:72698358-72699453	K562	blood:	n/a	n/a
27	ZNF384	chr16:72698604-72699149	K562	blood:	n/a	n/a
28	SP2	chr16:72698611-72699321	HepG2	liver:	n/a	chr16:72698904-72698927 chr16:72698974-72698989
29	POLR2A	chr16:72698428-72699322	HEK293	kidney:	n/a	n/a
30	POLR2A	chr16:72698383-72699310	HCT-116	colon:	n/a	n/a
31	ATF2	chr16:72698566-72699222	H1-hESC	embryonic stem cell:	n/a	n/a
32	POLR2A	chr16:72697953-72699947	GM12891	blood:	n/a	n/a
33	RFX5	chr16:72697687-72699776	SK-N-SH	brain:	n/a	chr16:72698994-72699009 chr16:72698965-72698979 chr16:72698997-72699012 chr16:72698997-72699012 chr16:72698963-72698977 chr16:72698997-72699012
34	POLR2A	chr16:72698252-72701233	K562	blood:	n/a	n/a
35	RAD21	chr16:72698305-72699296	H1-hESC	embryonic stem cell:	n/a	n/a
36	POLR2A	chr16:72698279-72699296	GM12892	blood:	n/a	n/a
37	ELF1	chr16:72698319-72699410	MCF-7	breast:	n/a	chr16:72699012-72699023 chr16:72699013-72699022
38	POLR2A	chr16:72698288-72699533	GM18951	blood:	n/a	n/a
39	POU2F2	chr16:72698376-72699308	GM12891	blood:	n/a	n/a
40	POLR2A	chr16:72698562-72699551	GM12878	blood:	n/a	n/a
41	POLR2A	chr16:72698475-72699425	U87	brain:	n/a	n/a
42	TBP	chr16:72698423-72699292	H1-hESC	embryonic stem cell:	n/a	n/a
43	GABPA	chr16:72698244-72699666	MCF-7	breast:	n/a	n/a
44	POLR2A	chr16:72698327-72699368	GM12892	blood:	n/a	n/a
45	POLR2A	chr16:72698256-72699290	GM12891	blood:	n/a	n/a
46	RCOR1	chr16:72698554-72699148	HepG2	liver:	n/a	n/a
47	CREB1	chr16:72698107-72699224	H1-hESC	embryonic stem cell:	n/a	chr16:72698225-72698238
48	IRF1	chr16:72698347-72699508	K562	blood:	n/a	n/a
49	EP300	chr16:72698471-72699502	GM12878	blood:	n/a	n/a
50	REST	chr16:72697776-72699636	H1-neurons	neurons:	n/a	chr16:72698260-72698269

No.	Distal block	Cell Line	Cell type
1	chr12:53343514..53344240-chr16:72698371..72698871,2	Hela-S3	cervix:
2	chr16:72698363..72699052-chr17:39845183..39845724,2	Hela-S3	cervix:
3	chr16:72696867..72698788-chr16:72960178..72962208,2	MCF-7	breast:
4	chr16:72698300..72698998-chr17:56708650..56709621,2	NB4	blood:
5	chr16:72691145..72694013-chr16:72696469..72698836,2	MCF-7	breast:
6	chr16:72659577..72662381-chr16:72697498..72700901,3	MCF-7	breast:
7	chr16:72697417..72699588-chr16:73081408..73083430,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000259768	TF binding region
ENSG00000140836	Chromatin interaction
ENSG00000173812	Chromatin interaction
ENSG00000261008	Chromatin interaction
ENSG00000111057	Chromatin interaction
ENSG00000170421	Chromatin interaction
ENSG00000212195	Chromatin interaction

Extended variants
information (count: 183 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:173)

rs_ID	r²[population]
rs1035983	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1035984	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10400973	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10492826	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11075930	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11075931	1.00[AFR][1000 genomes]
rs11075938	0.83[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs11075940	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs11531326	1.00[AFR][1000 genomes]
rs12051226	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12051305	0.82[ASN][1000 genomes]
rs12051376	1.00[AFR][1000 genomes]
rs12051436	1.00[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs12103361	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes]
rs12445485	1.00[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs12595874	0.89[CHB][hapmap];0.94[JPT][hapmap];0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12596196	1.00[AFR][1000 genomes]
rs12596421	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12596520	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12597202	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12597703	1.00[AFR][1000 genomes]
rs12598003	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12598048	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12598858	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12599442	0.83[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs12599589	1.00[AFR][1000 genomes]
rs12600293	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs12600298	0.83[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12708932	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12921040	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12924860	0.84[AMR][1000 genomes]
rs13332877	0.89[CHB][hapmap];0.84[JPT][hapmap];1.00[EUR][1000 genomes]
rs1366846	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1366847	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs1429431	0.90[ASN][1000 genomes]
rs1429432	0.88[ASN][1000 genomes]
rs1429433	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1529527	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs1544964	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16970969	0.81[ASN][1000 genomes]
rs16970987	0.81[ASN][1000 genomes]
rs16970998	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs16971279	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16971281	1.00[EUR][1000 genomes]
rs16971287	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16971288	1.00[EUR][1000 genomes]
rs16971290	1.00[EUR][1000 genomes]
rs16971292	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16971306	0.83[CHB][hapmap];0.82[JPT][hapmap];1.00[EUR][1000 genomes]
rs16971312	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16971314	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes]
rs16971315	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16971318	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16971321	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes]
rs16971324	1.00[AFR][1000 genomes]
rs16971325	1.00[AFR][1000 genomes]
rs1859593	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1990096	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2040939	0.83[AFR][1000 genomes]
rs2040940	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2043022	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs2107153	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2115625	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2115626	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2163067	1.00[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs2229286	0.83[CHB][hapmap];0.88[JPT][hapmap]
rs2229290	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266932	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266934	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266935	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266936	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266938	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2266939	0.83[CHB][hapmap];0.83[JPT][hapmap];1.00[EUR][1000 genomes]
rs2266941	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes]
rs2266942	0.83[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes]
rs2266944	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2358805	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2358811	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2358812	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2860232	1.00[AFR][1000 genomes]
rs2884552	1.00[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs2905695	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs2905696	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs2914768	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2914770	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2914772	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2914773	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2914776	0.82[ASN][1000 genomes]
rs2914778	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2914781	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs292913	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292914	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292915	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292916	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292917	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292918	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292919	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292920	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292921	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs292922	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292923	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292924	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292925	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292926	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292927	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292928	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292929	0.85[ASN][1000 genomes]
rs292930	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292931	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292932	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292933	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292934	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs292935	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292937	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292938	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292939	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs292940	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs292941	0.86[ASN][1000 genomes]
rs292942	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs292943	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs292945	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs292946	1.00[EUR][1000 genomes]
rs292947	1.00[EUR][1000 genomes]
rs2967238	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs2967239	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs3812983	0.83[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4238966	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4278755	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4788474	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs4788479	1.00[EUR][1000 genomes]
rs4788655	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4788657	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4788663	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4788664	1.00[AFR][1000 genomes]
rs4788666	1.00[AFR][1000 genomes]
rs4788667	1.00[AFR][1000 genomes]
rs59254438	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60974482	1.00[EUR][1000 genomes]
rs6416744	1.00[AFR][1000 genomes]
rs6499575	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs6499576	1.00[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs6499578	1.00[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6499579	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs6499581	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6499591	1.00[AFR][1000 genomes]
rs714101	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs714102	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7187123	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7192128	1.00[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7194567	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7199644	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7199653	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7203205	0.96[ASN][1000 genomes]
rs7203232	0.89[ASN][1000 genomes]
rs7206490	1.00[AFR][1000 genomes]
rs740176	1.00[AFR][1000 genomes]
rs74028108	0.82[ASN][1000 genomes]
rs7405242	0.82[ASN][1000 genomes]
rs8044614	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8048815	0.83[ASN][1000 genomes]
rs8053419	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs8059268	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs9302640	1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs982799	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9923006	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9924937	0.93[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs9927280	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs9933433	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs9934215	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs9935202	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs9935250	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs9936708	0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs999210	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1060983	chr16:72074832-72791629	Genic enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
2	nsv1060804	chr16:72078486-72791629	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
3	nsv534039	chr16:72287171-72851170	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
4	nsv530712	chr16:72499171-72744114	Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
5	nsv1063049	chr16:72577004-72887111	Weak transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
6	nsv542952	chr16:72577004-72887111	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
7	esv1818026	chr16:72633305-72704680	Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
8	nsv1059111	chr16:72647569-72751907	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	esv1822094	chr16:72694760-72787961	Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
10	nsv572958	chr16:72696112-72778617	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:72697400-72700200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr16:72697600-72699400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr16:72697600-72699400	Active TSS	HMEC	breast
4	chr16:72697600-72699400	Active TSS	NH-A	brain
5	chr16:72697600-72699400	Active TSS	NHEK	skin
6	chr16:72697600-72699600	Active TSS	ES-I3 Cell Line	embryonic stem cell
7	chr16:72697600-72699600	Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr16:72697600-72699600	Active TSS	Fetal Thymus	thymus
9	chr16:72697600-72699600	Active TSS	HSMM	muscle
10	chr16:72697600-72699800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr16:72697600-72699800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr16:72697600-72699800	Active TSS	HUES6 Cell Line	embryonic stem cell
13	chr16:72697600-72699800	Active TSS	Muscle Satellite Cultured Cells	--
14	chr16:72697600-72699800	Active TSS	GM12878-XiMat	blood
15	chr16:72697600-72700000	Active TSS	H1 Cell Line	embryonic stem cell
16	chr16:72697600-72700000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr16:72697600-72700000	Active TSS	HUES48 Cell Line	embryonic stem cell
18	chr16:72697600-72700000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr16:72697600-72700000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr16:72697600-72700000	Active TSS	A549	lung
21	chr16:72697600-72700000	Active TSS	NHLF	lung
22	chr16:72697600-72700400	Active TSS	HUES64 Cell Line	embryonic stem cell
23	chr16:72697600-72700400	Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr16:72697800-72699400	Active TSS	Fetal Muscle Leg	muscle
25	chr16:72697800-72699400	Active TSS	Osteobl	bone
26	chr16:72697800-72699600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr16:72697800-72699600	Active TSS	Pancreatic Islets	Pancreatic Islet
28	chr16:72697800-72699600	Active TSS	Rectal Mucosa Donor 29	rectum
29	chr16:72697800-72699600	Active TSS	HSMMtube	muscle
30	chr16:72697800-72699800	Active TSS	H9 Cell Line	embryonic stem cell
31	chr16:72697800-72699800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr16:72697800-72699800	Active TSS	Breast Myoepithelial Primary Cells	Breast
33	chr16:72697800-72699800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr16:72697800-72699800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr16:72697800-72699800	Active TSS	Fetal Intestine Large	intestine
36	chr16:72697800-72699800	Active TSS	Fetal Stomach	stomach
37	chr16:72697800-72699800	Active TSS	Stomach Smooth Muscle	stomach
38	chr16:72697800-72699800	Active TSS	NHDF-Ad	bronchial
39	chr16:72697800-72700000	Active TSS	Fetal Kidney	kidney
40	chr16:72698000-72698800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
41	chr16:72698000-72699400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr16:72698000-72699400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr16:72698000-72699400	Active TSS	Left Ventricle	heart
44	chr16:72698000-72699400	Active TSS	Sigmoid Colon	Sigmoid Colon
45	chr16:72698000-72699600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
46	chr16:72698000-72699600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr16:72698000-72699600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr16:72698000-72699600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr16:72698000-72699600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr16:72698000-72699600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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