Variant report

Variant rs1990096
Chromosome Location chr16:72847251-72847252
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72822200-72866800 Weak transcription Brain Angular Gyrus brain
2 chr16:72822200-72869800 Weak transcription Primary B cells from peripheral blood blood
3 chr16:72822800-72855600 Weak transcription Thymus Thymus
4 chr16:72825200-72847600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr16:72832200-72858400 Weak transcription Brain Hippocampus Middle brain
6 chr16:72832600-72847600 Weak transcription Right Ventricle heart
7 chr16:72832600-72852000 Weak transcription Rectal Smooth Muscle rectum
8 chr16:72832600-72874800 Weak transcription Spleen Spleen
9 chr16:72833000-72847600 Weak transcription Pancreas Pancrea
10 chr16:72833600-72856000 Weak transcription Primary B cells from cord blood blood
11 chr16:72833600-72861000 Weak transcription Hela-S3 cervix
12 chr16:72833800-72861800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr16:72834000-72848200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr16:72834200-72847800 Weak transcription HMEC breast
15 chr16:72834200-72874200 Weak transcription Primary hematopoietic stem cells blood
16 chr16:72834800-72853200 Weak transcription NH-A brain
17 chr16:72834800-72872200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr16:72835000-72852200 Weak transcription Brain Cingulate Gyrus brain
19 chr16:72835000-72853600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr16:72835200-72860800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr16:72835200-72867400 Weak transcription NHEK skin
22 chr16:72836400-72853000 Weak transcription Fetal Brain Male brain
23 chr16:72842200-72849800 Strong transcription HSMM muscle
24 chr16:72842800-72853800 Weak transcription Psoas Muscle Psoas
25 chr16:72843600-72851000 Weak transcription HSMMtube muscle
26 chr16:72845000-72847600 Enhancers Liver Liver
27 chr16:72845600-72848600 Weak transcription Dnd41 blood
28 chr16:72845600-72851400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr16:72845600-72852200 Weak transcription Brain Substantia Nigra brain
30 chr16:72845600-72852200 Weak transcription Fetal Muscle Leg muscle
31 chr16:72845600-72852200 Weak transcription Osteobl bone
32 chr16:72845600-72852400 Weak transcription NHDF-Ad bronchial
33 chr16:72845600-72853200 Weak transcription Placenta Amnion Placenta Amnion
34 chr16:72845600-72855000 Weak transcription Fetal Lung lung
35 chr16:72845600-72858800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr16:72845600-72861400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr16:72845600-72861600 Weak transcription Fetal Kidney kidney
38 chr16:72845600-72869400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr16:72845600-72874400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr16:72845800-72847400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr16:72845800-72847600 Weak transcription Esophagus oesophagus
42 chr16:72845800-72849000 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr16:72845800-72852200 Weak transcription Brain Anterior Caudate brain
44 chr16:72845800-72853200 Weak transcription NHLF lung
45 chr16:72845800-72853400 Weak transcription Lung lung
46 chr16:72845800-72862200 Weak transcription Colonic Mucosa Colon
47 chr16:72845800-72863200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr16:72845800-72863200 Weak transcription Duodenum Mucosa Duodenum
49 chr16:72845800-72865200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr16:72845800-72867000 Weak transcription Ovary ovary

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