The 2.0 version of rSNPBase

Variant report

Variant rs4788669
Chromosome Location chr16:72902056-72902057
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72883200-72909200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr16:72883400-72908400 Weak transcription Fetal Intestine Large intestine
3 chr16:72883400-72918800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr16:72883600-72912200 Weak transcription Ovary ovary
5 chr16:72883800-72908800 Weak transcription Hela-S3 cervix
6 chr16:72884200-72902200 Weak transcription Right Ventricle heart
7 chr16:72884200-72911600 Weak transcription Gastric stomach
8 chr16:72885200-72909000 Weak transcription Lung lung
9 chr16:72889200-72902400 Weak transcription Spleen Spleen
10 chr16:72889200-72908800 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr16:72891400-72908400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr16:72893000-72904000 Weak transcription Pancreas Pancrea
13 chr16:72893000-72909600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr16:72893200-72911400 Weak transcription Stomach Mucosa stomach
15 chr16:72893400-72909000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr16:72893600-72902600 Weak transcription Adipose Nuclei Adipose
17 chr16:72893600-72909000 Weak transcription Colon Smooth Muscle Colon
18 chr16:72893600-72909400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr16:72893800-72907000 Weak transcription Fetal Kidney kidney
20 chr16:72893800-72909200 Weak transcription Rectal Smooth Muscle rectum
21 chr16:72894200-72906800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr16:72894200-72906800 Weak transcription HSMMtube muscle
23 chr16:72894400-72909200 Weak transcription Fetal Lung lung
24 chr16:72895000-72906800 Weak transcription NHLF lung
25 chr16:72895200-72908200 Weak transcription Esophagus oesophagus
26 chr16:72895200-72918000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr16:72895400-72908400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr16:72895400-72909200 Weak transcription Psoas Muscle Psoas
29 chr16:72895400-72909200 Weak transcription Right Atrium heart
30 chr16:72896000-72908400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr16:72896200-72908600 Weak transcription Placenta Amnion Placenta Amnion
32 chr16:72896600-72909200 Weak transcription Duodenum Mucosa Duodenum
33 chr16:72897400-72909000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr16:72898200-72904000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr16:72898400-72902800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr16:72898400-72903600 Strong transcription HepG2 liver
37 chr16:72899000-72902400 Strong transcription Fetal Muscle Trunk muscle
38 chr16:72899600-72909200 Weak transcription A549 lung
39 chr16:72899800-72906600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr16:72899800-72906600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr16:72899800-72907000 Weak transcription Muscle Satellite Cultured Cells --
42 chr16:72899800-72907800 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr16:72899800-72909600 Weak transcription Liver Liver
44 chr16:72900000-72906600 Weak transcription Placenta Placenta
45 chr16:72900000-72908400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr16:72900000-72908800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr16:72900000-72908800 Weak transcription Left Ventricle heart
48 chr16:72900000-72909000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr16:72900000-72910600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr16:72900200-72906400 Weak transcription HSMM muscle

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Last update: Aug 31, 2015