Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10015561	0.82[CHB][hapmap]
rs10021932	0.82[CHB][hapmap]
rs10030659	0.86[CHB][hapmap]
rs11727585	0.86[CHB][hapmap]
rs11728647	0.82[CHB][hapmap]
rs11936304	0.88[CHB][hapmap];0.95[JPT][hapmap]
rs13125961	0.83[CHB][hapmap]
rs13131816	0.82[CHB][hapmap]
rs1372486	0.87[CHB][hapmap]
rs1442097	0.86[CHB][hapmap]
rs1561777	0.80[AFR][1000 genomes]
rs2028524	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2119779	0.86[CHB][hapmap]
rs2165611	0.86[CHB][hapmap]
rs4501194	0.80[YRI][hapmap]
rs6819531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7666212	0.80[YRI][hapmap]
rs9291304	0.80[YRI][hapmap]
rs971353	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs971354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv537078	chr4:47059778-47137372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv829922	chr4:47093785-47261181	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv879003	chr4:47102993-47215939	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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