Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:11665029..11667238-chr18:11692110..11694200,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10468679	1.00[CHB][hapmap]
rs10502413	1.00[CHB][hapmap]
rs11872939	1.00[CHB][hapmap]
rs12458181	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1424913	1.00[CHB][hapmap]
rs1477484	1.00[CHB][hapmap]
rs1559579	1.00[CHB][hapmap]
rs16976628	1.00[CHB][hapmap]
rs16976639	1.00[CHB][hapmap]
rs16976666	1.00[CHB][hapmap]
rs16976687	1.00[CHB][hapmap]
rs61495657	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6505675	1.00[CHB][hapmap]
rs71350456	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7227117	1.00[CHB][hapmap]
rs787556	1.00[CHB][hapmap]
rs8099026	1.00[CHB][hapmap]
rs8099153	1.00[CHB][hapmap]
rs9303743	1.00[CHB][hapmap]
rs9646452	1.00[CHB][hapmap]
rs9652928	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9676233	1.00[CHB][hapmap]
rs9946455	1.00[CHB][hapmap]
rs9954486	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1066659	chr18:11246502-11709409	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
2	esv3362008	chr18:11647654-11959830	Active TSS Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv518207	chr18:11670845-11695676	Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv516128	chr18:11683431-11695676	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:11690400-11694400	Weak transcription	NHEK	skin
2	chr18:11690400-11713800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr18:11690600-11695200	Weak transcription	HMEC	breast

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