Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11165735	1.00[EUR][1000 genomes]
rs11165736	1.00[EUR][1000 genomes]
rs11165739	1.00[EUR][1000 genomes]
rs11165747	1.00[EUR][1000 genomes]
rs11165748	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11165749	1.00[EUR][1000 genomes]
rs11165750	1.00[EUR][1000 genomes]
rs11165752	1.00[EUR][1000 genomes]
rs12061423	1.00[EUR][1000 genomes]
rs12065968	1.00[EUR][1000 genomes]
rs12066761	1.00[EUR][1000 genomes]
rs12070230	1.00[EUR][1000 genomes]
rs12071395	1.00[EUR][1000 genomes]
rs12075543	1.00[EUR][1000 genomes]
rs12081936	1.00[EUR][1000 genomes]
rs12081979	1.00[EUR][1000 genomes]
rs12083045	1.00[EUR][1000 genomes]
rs12084508	1.00[EUR][1000 genomes]
rs12087038	1.00[EUR][1000 genomes]
rs12087881	1.00[EUR][1000 genomes]
rs12088005	1.00[EUR][1000 genomes]
rs12088015	1.00[EUR][1000 genomes]
rs12090340	1.00[EUR][1000 genomes]
rs12090892	1.00[EUR][1000 genomes]
rs12091668	1.00[EUR][1000 genomes]
rs12095003	1.00[EUR][1000 genomes]
rs56767532	1.00[EUR][1000 genomes]
rs57248521	1.00[EUR][1000 genomes]
rs58442776	1.00[EUR][1000 genomes]
rs6697652	0.90[AFR][1000 genomes]
rs6701933	1.00[EUR][1000 genomes]
rs7523315	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491816	chr1:97266403-98223619	Enhancers Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv522619	chr1:97440897-97447183	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:97439400-97444600	Weak transcription	Fetal Muscle Leg	muscle
2	chr1:97439600-97444200	Weak transcription	Fetal Stomach	stomach
3	chr1:97439800-97451800	Weak transcription	Fetal Heart	heart

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