Variant report

Variant rs1531140
Chromosome Location chr15:42125234-42125235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42121000-42147400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:42121200-42126000 Enhancers Primary T helper 17 cells PMA-I stimulated --
3 chr15:42121200-42126600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr15:42121200-42130400 Weak transcription Stomach Mucosa stomach
5 chr15:42121400-42125400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr15:42121400-42125400 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr15:42121400-42126200 Enhancers Primary T helper cells fromperipheralblood blood
8 chr15:42121400-42126200 Weak transcription Ovary ovary
9 chr15:42121400-42129400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr15:42121400-42130400 Weak transcription Psoas Muscle Psoas
11 chr15:42121400-42133800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr15:42121400-42138200 Weak transcription H1 Cell Line embryonic stem cell
13 chr15:42121400-42138400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:42121400-42138400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr15:42121400-42138400 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr15:42121400-42138400 Weak transcription Primary B cells from cord blood blood
17 chr15:42121400-42147600 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr15:42121400-42147600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr15:42121600-42125400 Weak transcription Fetal Kidney kidney
20 chr15:42121600-42130200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr15:42121600-42134000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr15:42121600-42137200 Weak transcription Osteobl bone
23 chr15:42121600-42137400 Weak transcription Small Intestine intestine
24 chr15:42121600-42138600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr15:42121600-42141400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr15:42121600-42141800 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr15:42121800-42136600 Weak transcription Brain Substantia Nigra brain
28 chr15:42121800-42140400 Weak transcription Hela-S3 cervix
29 chr15:42122000-42133000 Weak transcription Colon Smooth Muscle Colon
30 chr15:42122000-42142400 Strong transcription Fetal Stomach stomach
31 chr15:42122000-42142600 Strong transcription Fetal Intestine Small intestine
32 chr15:42122200-42125400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
33 chr15:42122200-42126600 Genic enhancers NHEK skin
34 chr15:42122200-42128000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr15:42122200-42130200 Weak transcription Fetal Heart heart
36 chr15:42122200-42145400 Weak transcription HepG2 liver
37 chr15:42122400-42125400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
38 chr15:42122400-42126400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr15:42122400-42127400 Weak transcription Brain Anterior Caudate brain
40 chr15:42122400-42142600 Weak transcription Fetal Brain Male brain
41 chr15:42122800-42125400 Strong transcription Fetal Brain Female brain
42 chr15:42122800-42125400 Strong transcription Stomach Smooth Muscle stomach
43 chr15:42122800-42125600 Enhancers Primary T helper naive cells fromperipheralblood blood
44 chr15:42122800-42137200 Weak transcription NHLF lung
45 chr15:42123000-42128000 Strong transcription Fetal Muscle Leg muscle
46 chr15:42123200-42125600 Genic enhancers Primary T cells from cord blood blood
47 chr15:42123200-42126800 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr15:42123200-42130200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr15:42123400-42125600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr15:42123400-42130800 Strong transcription Primary monocytes fromperipheralblood blood

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