Variant report

Variant rs17678552
Chromosome Location chr15:42066190-42066191
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42059600-42066200 Weak transcription Aorta Aorta
2 chr15:42059600-42066200 Weak transcription Lung lung
3 chr15:42059600-42066400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:42059800-42066200 Weak transcription Ovary ovary
5 chr15:42065200-42066200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
6 chr15:42065200-42066200 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr15:42065200-42066200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
8 chr15:42065200-42066200 Enhancers Stomach Mucosa stomach
9 chr15:42065200-42066200 Enhancers Spleen Spleen
10 chr15:42065200-42066200 Flanking Active TSS GM12878-XiMat blood
11 chr15:42065200-42066200 Flanking Active TSS HSMMtube muscle
12 chr15:42065200-42066400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:42065200-42066400 Flanking Active TSS Dnd41 blood
14 chr15:42065200-42068000 Active TSS ES-WA7 Cell Line embryonic stem cell
15 chr15:42065400-42066200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
16 chr15:42065400-42066200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
17 chr15:42065400-42066200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr15:42065400-42066200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:42065400-42066200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr15:42065400-42066200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr15:42065400-42066200 Enhancers Gastric stomach
22 chr15:42065400-42066200 Flanking Active TSS Rectal Smooth Muscle rectum
23 chr15:42065400-42066200 Enhancers Sigmoid Colon Sigmoid Colon
24 chr15:42065400-42066200 Enhancers Small Intestine intestine
25 chr15:42065400-42066200 Flanking Active TSS NHDF-Ad bronchial
26 chr15:42065400-42066400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr15:42065400-42066400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr15:42065400-42066600 Flanking Active TSS Stomach Smooth Muscle stomach
29 chr15:42065400-42068000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr15:42065600-42066200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr15:42065600-42066200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr15:42065600-42066200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
33 chr15:42065600-42066200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr15:42065600-42066200 Flanking Active TSS HSMM muscle
35 chr15:42065600-42066200 Flanking Active TSS K562 blood
36 chr15:42065600-42066200 Flanking Active TSS Osteobl bone
37 chr15:42065600-42066400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
38 chr15:42065600-42066400 Flanking Active TSS Primary B cells from cord blood blood
39 chr15:42065600-42066400 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr15:42065600-42066400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
41 chr15:42065600-42066400 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr15:42065600-42067200 Active TSS H1 Cell Line embryonic stem cell
43 chr15:42065600-42067400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr15:42065800-42066200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
45 chr15:42065800-42066200 Flanking Active TSS Brain Anterior Caudate brain
46 chr15:42065800-42066200 Flanking Active TSS Brain Germinal Matrix brain
47 chr15:42065800-42066200 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr15:42065800-42066200 Flanking Active TSS Fetal Brain Female brain
49 chr15:42065800-42066200 Flanking Active TSS Fetal Stomach stomach
50 chr15:42065800-42066200 Flanking Active TSS Rectal Mucosa Donor 31 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links