Variant report

Variant rs153814
Chromosome Location chr5:178764482-178764483
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178748200-178766600 Weak transcription Muscle Satellite Cultured Cells --
2 chr5:178754200-178768800 Weak transcription NHDF-Ad bronchial
3 chr5:178757800-178768200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:178759200-178768800 Weak transcription HSMMtube muscle
5 chr5:178759400-178769000 Weak transcription HSMM muscle
6 chr5:178760800-178768200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr5:178761000-178766000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr5:178761000-178768200 Strong transcription Osteobl bone
9 chr5:178761400-178765000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr5:178761400-178769000 Weak transcription Fetal Intestine Small intestine
11 chr5:178761800-178767000 Weak transcription Ovary ovary
12 chr5:178762600-178770800 Weak transcription Aorta Aorta
13 chr5:178762800-178765600 Bivalent Enhancer Fetal Muscle Trunk muscle
14 chr5:178763200-178764800 Strong transcription NHLF lung
15 chr5:178763200-178765000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr5:178763200-178765200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:178763200-178766800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
18 chr5:178763400-178766400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:178763600-178766600 Enhancers Placenta Amnion Placenta Amnion
20 chr5:178763800-178764600 Enhancers Fetal Brain Male brain
21 chr5:178763800-178764600 Enhancers Pancreas Pancrea
22 chr5:178763800-178764800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr5:178763800-178765000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
24 chr5:178763800-178765000 Genic enhancers Spleen Spleen
25 chr5:178763800-178765600 Enhancers ES-WA7 Cell Line embryonic stem cell
26 chr5:178763800-178765600 Genic enhancers Fetal Stomach stomach
27 chr5:178763800-178766600 Genic enhancers Breast Myoepithelial Primary Cells Breast
28 chr5:178764000-178764600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:178764000-178764800 Weak transcription H1 Cell Line embryonic stem cell
30 chr5:178764000-178765200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:178764000-178765800 Enhancers Adipose Nuclei Adipose
32 chr5:178764200-178764600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
33 chr5:178764200-178764600 Genic enhancers Fetal Lung lung
34 chr5:178764200-178765000 Enhancers Fetal Muscle Leg muscle
35 chr5:178764200-178765600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:178764200-178765600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:178764400-178764600 Active TSS H9 Cell Line embryonic stem cell
38 chr5:178764400-178764600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:178764400-178764600 Enhancers Esophagus oesophagus
40 chr5:178764400-178765000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr5:178764400-178765200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin

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