Variant report

Variant rs411010
Chromosome Location chr5:178763097-178763098
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178748200-178766600 Weak transcription Muscle Satellite Cultured Cells --
2 chr5:178752600-178764400 Weak transcription Esophagus oesophagus
3 chr5:178754200-178768800 Weak transcription NHDF-Ad bronchial
4 chr5:178754400-178763200 Weak transcription NHLF lung
5 chr5:178754400-178763800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:178757800-178763400 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:178757800-178768200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr5:178758200-178763400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:178759200-178768800 Weak transcription HSMMtube muscle
10 chr5:178759400-178763200 Weak transcription Colon Smooth Muscle Colon
11 chr5:178759400-178769000 Weak transcription HSMM muscle
12 chr5:178760200-178763800 Weak transcription Spleen Spleen
13 chr5:178760800-178768200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr5:178761000-178766000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr5:178761000-178768200 Strong transcription Osteobl bone
16 chr5:178761200-178763800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr5:178761400-178763200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr5:178761400-178763200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:178761400-178763200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr5:178761400-178763200 Weak transcription Fetal Stomach stomach
21 chr5:178761400-178764200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:178761400-178765000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr5:178761400-178769000 Weak transcription Fetal Intestine Small intestine
24 chr5:178761600-178763200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:178761600-178763600 Weak transcription Placenta Amnion Placenta Amnion
26 chr5:178761600-178764000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:178761800-178767000 Weak transcription Ovary ovary
28 chr5:178762000-178763600 Enhancers Adipose Nuclei Adipose
29 chr5:178762200-178764200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr5:178762600-178763400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:178762600-178763800 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr5:178762600-178764200 Bivalent Enhancer Fetal Muscle Leg muscle
33 chr5:178762600-178770800 Weak transcription Aorta Aorta
34 chr5:178762800-178764200 Weak transcription Fetal Lung lung
35 chr5:178762800-178765600 Bivalent Enhancer Fetal Muscle Trunk muscle
36 chr5:178763000-178763400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:178763000-178764200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin

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