Variant report

Variant rs28549
Chromosome Location chr5:178766912-178766913
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178754200-178768800 Weak transcription NHDF-Ad bronchial
2 chr5:178757800-178768200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr5:178759200-178768800 Weak transcription HSMMtube muscle
4 chr5:178759400-178769000 Weak transcription HSMM muscle
5 chr5:178760800-178768200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr5:178761000-178768200 Strong transcription Osteobl bone
7 chr5:178761400-178769000 Weak transcription Fetal Intestine Small intestine
8 chr5:178761800-178767000 Weak transcription Ovary ovary
9 chr5:178762600-178770800 Weak transcription Aorta Aorta
10 chr5:178764600-178770200 Weak transcription Esophagus oesophagus
11 chr5:178765000-178768800 Weak transcription Spleen Spleen
12 chr5:178765200-178768800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr5:178765200-178769000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr5:178765600-178768400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:178765600-178768800 Strong transcription Fetal Stomach stomach
16 chr5:178765800-178767000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr5:178766000-178768000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr5:178766000-178768200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr5:178766200-178767000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:178766200-178768000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr5:178766200-178768800 Strong transcription NHLF lung
22 chr5:178766400-178767400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:178766600-178768000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr5:178766600-178768000 Strong transcription Muscle Satellite Cultured Cells --
25 chr5:178766600-178768000 Strong transcription Adipose Nuclei Adipose
26 chr5:178766600-178768000 Strong transcription Fetal Lung lung
27 chr5:178766600-178769400 Weak transcription Placenta Amnion Placenta Amnion
28 chr5:178766800-178769200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links