Variant report

Variant rs340419
Chromosome Location chr5:178758909-178758910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178748200-178766600 Weak transcription Muscle Satellite Cultured Cells --
2 chr5:178752600-178764400 Weak transcription Esophagus oesophagus
3 chr5:178753800-178761600 Weak transcription Fetal Lung lung
4 chr5:178754200-178768800 Weak transcription NHDF-Ad bronchial
5 chr5:178754400-178760800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr5:178754400-178763200 Weak transcription NHLF lung
7 chr5:178754400-178763800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:178754600-178761000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr5:178754800-178760200 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr5:178754800-178761000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:178754800-178761000 Weak transcription Osteobl bone
12 chr5:178754800-178762200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr5:178754800-178762800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:178757400-178759000 Enhancers Ovary ovary
15 chr5:178757400-178759800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr5:178757800-178763400 Weak transcription H1 Cell Line embryonic stem cell
17 chr5:178757800-178768200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr5:178758000-178759200 Enhancers HSMMtube muscle
19 chr5:178758000-178759600 Enhancers Fetal Heart heart
20 chr5:178758000-178759800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr5:178758000-178760000 Enhancers Fetal Muscle Leg muscle
22 chr5:178758200-178759200 Weak transcription Placenta Amnion Placenta Amnion
23 chr5:178758200-178759600 Enhancers Fetal Stomach stomach
24 chr5:178758200-178761600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:178758200-178763400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:178758400-178759000 Enhancers Lung lung
27 chr5:178758400-178760400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr5:178758600-178759400 Enhancers Colon Smooth Muscle Colon
29 chr5:178758600-178759400 Enhancers Fetal Muscle Trunk muscle
30 chr5:178758600-178759400 Enhancers HSMM muscle
31 chr5:178758800-178759000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr5:178758800-178759000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr5:178758800-178759000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
34 chr5:178758800-178759000 Enhancers Spleen Spleen
35 chr5:178758800-178759200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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