Variant report

Variant	rs1547163
Chromosome Location	chr10:44365715-44365716
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44363605..44366382-chr10:44366724..44368255,2	K562	blood:
2	chr10:44364472..44366109-chr10:44368690..44370591,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1008804	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10751346	0.83[ASN][1000 genomes]
rs1078113	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899924	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11238748	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11238755	0.80[EUR][1000 genomes]
rs1578854	0.86[EUR][1000 genomes]
rs61859386	0.81[ASN][1000 genomes]
rs7070116	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7920511	0.87[ASN][1000 genomes]
rs7921870	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7921967	0.83[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44357800-44367200	Enhancers	Left Ventricle	heart
2	chr10:44359800-44366400	Weak transcription	Lung	lung
3	chr10:44360000-44392200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:44360400-44366400	Weak transcription	Brain Hippocampus Middle	brain
5	chr10:44361200-44365800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr10:44361800-44373000	Weak transcription	Fetal Heart	heart
7	chr10:44363200-44367000	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr10:44363600-44366400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr10:44363600-44366400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:44364200-44366400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr10:44364200-44366600	Weak transcription	HSMM	muscle
12	chr10:44364200-44366600	Weak transcription	HSMMtube	muscle
13	chr10:44364200-44374000	Weak transcription	NHLF	lung
14	chr10:44364400-44366000	Weak transcription	Adipose Nuclei	Adipose
15	chr10:44364800-44365800	Weak transcription	Fetal Stomach	stomach
16	chr10:44364800-44366400	Weak transcription	Brain Cingulate Gyrus	brain
17	chr10:44365000-44366400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr10:44365000-44366600	Weak transcription	Right Atrium	heart
19	chr10:44365000-44366800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr10:44365000-44373400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr10:44365000-44373400	Weak transcription	Right Ventricle	heart
22	chr10:44365200-44366600	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr10:44365400-44371400	Weak transcription	NHDF-Ad	bronchial
24	chr10:44365600-44366600	Enhancers	Spleen	Spleen

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