Variant report

Variant	rs61859386
Chromosome Location	chr10:44338283-44338284
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr10:44337942-44338312	H1-hESC	embryonic stem cell:	n/a	n/a
2	E2F6	chr10:44337908-44338392	H1-hESC	embryonic stem cell:	n/a	n/a

Variant related genes	Relation type
LINC00619	TF binding region

rs_ID	r²[population]
rs1008804	0.83[ASN][1000 genomes]
rs1078113	0.83[ASN][1000 genomes]
rs10899924	0.83[ASN][1000 genomes]
rs11238734	0.81[EUR][1000 genomes]
rs11238748	0.82[ASN][1000 genomes]
rs1547163	0.81[ASN][1000 genomes]
rs7070116	0.81[ASN][1000 genomes]
rs7076199	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7096312	0.83[EUR][1000 genomes]
rs7921870	0.82[ASN][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44335200-44339400	Weak transcription	Psoas Muscle	Psoas
2	chr10:44337000-44339400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:44337400-44342400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr10:44337600-44338400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr10:44337600-44338400	Enhancers	NHDF-Ad	bronchial
6	chr10:44337600-44338600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr10:44337600-44338600	Weak transcription	Spleen	Spleen
8	chr10:44337800-44338600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr10:44337800-44338600	Enhancers	Muscle Satellite Cultured Cells	--
10	chr10:44337800-44339000	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr10:44338000-44338800	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr10:44338000-44338800	Enhancers	Right Atrium	heart
13	chr10:44338000-44339200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr10:44338000-44339600	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr10:44338200-44338400	Enhancers	Esophagus	oesophagus
16	chr10:44338200-44338400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
17	chr10:44338200-44338600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr10:44338200-44338600	Enhancers	Ovary	ovary
19	chr10:44338200-44339000	Enhancers	H9 Cell Line	embryonic stem cell
20	chr10:44338200-44339800	Weak transcription	Lung	lung
21	chr10:44338200-44340200	Enhancers	Adipose Nuclei	Adipose
22	chr10:44338200-44340600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr10:44338200-44341200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr10:44338200-44341800	Enhancers	Osteobl	bone
25	chr10:44338200-44342200	Enhancers	Left Ventricle	heart
26	chr10:44338200-44342800	Enhancers	NHLF	lung

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