Variant report
| Variant | rs1590578 |
|---|---|
| Chromosome Location | chr1:165487820-165487821 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:165486942..165488899-chr1:165489410..165491188,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs10465551 | 0.86[ASN][1000 genomes] |
| rs10494444 | 0.86[ASN][1000 genomes] |
| rs16846009 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs16846680 | 1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs1981167 | 1.00[EUR][1000 genomes] |
| rs2013490 | 0.84[ASN][1000 genomes] |
| rs206236 | 0.84[ASN][1000 genomes] |
| rs2252583 | 0.86[ASN][1000 genomes] |
| rs285411 | 0.93[ASN][1000 genomes] |
| rs411083 | 0.86[ASN][1000 genomes] |
| rs4290038 | 1.00[EUR][1000 genomes] |
| rs447374 | 0.86[ASN][1000 genomes] |
| rs60128426 | 0.86[ASN][1000 genomes] |
| rs72693830 | 0.84[ASN][1000 genomes] |
| rs73027004 | 0.86[ASN][1000 genomes] |
| rs73027007 | 0.86[ASN][1000 genomes] |
| rs73027009 | 0.86[ASN][1000 genomes] |
| rs74118817 | 0.86[ASN][1000 genomes] |
| rs9333367 | 1.00[EUR][1000 genomes] |
| rs9333376 | 1.00[EUR][1000 genomes] |
| rs9333391 | 1.00[EUR][1000 genomes] |
| rs9333393 | 1.00[EUR][1000 genomes] |
| rs9333394 | 1.00[EUR][1000 genomes] |
| rs9333397 | 1.00[EUR][1000 genomes] |
| rs9333405 | 1.00[EUR][1000 genomes] |
| rs9333414 | 1.00[EUR][1000 genomes] |
| rs9333417 | 1.00[EUR][1000 genomes] |
| rs9333418 | 1.00[EUR][1000 genomes] |
| rs9333419 | 1.00[EUR][1000 genomes] |
| rs9333421 | 1.00[EUR][1000 genomes] |
| rs9333424 | 1.00[EUR][1000 genomes] |
| rs9333425 | 1.00[EUR][1000 genomes] |
| rs9333426 | 1.00[EUR][1000 genomes] |
| rs9333427 | 1.00[EUR][1000 genomes] |
| rs9333428 | 1.00[EUR][1000 genomes] |
| rs9333429 | 1.00[EUR][1000 genomes] |
| rs9333430 | 1.00[EUR][1000 genomes] |
| rs9333431 | 1.00[EUR][1000 genomes] |
| rs9333434 | 1.00[EUR][1000 genomes] |
| rs9333435 | 1.00[EUR][1000 genomes] |
| rs9333437 | 1.00[EUR][1000 genomes] |
| rs9333472 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:165483800-165493400 | Weak transcription | Fetal Heart | heart |
