Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:61718056..61720899-chr13:61723464..61726288,2	K562	blood:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1399313	0.83[EUR][1000 genomes]
rs1514545	0.83[EUR][1000 genomes]
rs1514547	0.83[EUR][1000 genomes]
rs1514548	0.82[EUR][1000 genomes]
rs2090142	0.83[EUR][1000 genomes]
rs2175952	0.83[EUR][1000 genomes]
rs2323084	0.83[EUR][1000 genomes]
rs3102172	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3102197	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3102198	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3102203	0.80[ASN][1000 genomes]
rs3102207	0.81[EUR][1000 genomes]
rs3102215	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3102216	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3102217	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3102218	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3102221	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3106587	0.80[ASN][1000 genomes]
rs3127262	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3127263	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3127273	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3127275	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3127282	0.81[EUR][1000 genomes]
rs3127283	0.81[EUR][1000 genomes]
rs3127284	0.81[EUR][1000 genomes]
rs7990392	0.83[EUR][1000 genomes]
rs7997231	0.83[EUR][1000 genomes]
rs7998099	0.83[EUR][1000 genomes]
rs9528294	0.81[EUR][1000 genomes]
rs9539047	0.83[EUR][1000 genomes]
rs9539048	0.82[EUR][1000 genomes]
rs9539049	0.83[EUR][1000 genomes]
rs9563882	0.83[EUR][1000 genomes]
rs9563885	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832627	chr13:61642811-61829217	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1 gene(s)	inside rSNPs	diseases
2	esv3444432	chr13:61665252-61781081	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1 gene(s)	inside rSNPs	diseases
3	nsv900243	chr13:61711163-61799269	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:61717800-61720600	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr13:61718400-61720400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr13:61719000-61720600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chr13:61719200-61720400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr13:61719800-61720600	ZNF genes & repeats	Gastric	stomach

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