Variant report

Variant	rs1612772
Chromosome Location	chr5:68374096-68374097
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10037187	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs149292	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs164563	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1650777	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs180390	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs182899	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1982773	0.85[ASN][1000 genomes]
rs2260234	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2327641	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2434344	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2434345	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2450228	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2450234	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2637136	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2876310	0.81[ASN][1000 genomes]
rs7448416	0.81[ASN][1000 genomes]
rs7710635	0.84[ASN][1000 genomes]
rs7722972	0.83[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68372200-68375000	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr5:68372200-68375400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr5:68372200-68379200	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr5:68372400-68374200	Weak transcription	Stomach Mucosa	stomach
5	chr5:68372400-68374400	Weak transcription	Fetal Intestine Large	intestine
6	chr5:68372400-68374400	Weak transcription	Fetal Intestine Small	intestine
7	chr5:68372400-68374600	Weak transcription	Duodenum Mucosa	Duodenum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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