Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:68334424..68336682-chr5:68388110..68389845,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000145740	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10037187	0.85[ASN][1000 genomes]
rs149292	0.95[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1612772	0.85[ASN][1000 genomes]
rs164563	0.93[ASN][1000 genomes]
rs1650777	0.86[ASN][1000 genomes]
rs180390	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs182899	0.94[ASN][1000 genomes]
rs2260234	0.86[ASN][1000 genomes]
rs2327641	0.86[ASN][1000 genomes]
rs2434344	0.86[ASN][1000 genomes]
rs2434345	0.86[ASN][1000 genomes]
rs2450228	0.86[ASN][1000 genomes]
rs2450234	0.88[ASN][1000 genomes]
rs2637136	0.86[ASN][1000 genomes]
rs2876310	0.94[ASN][1000 genomes]
rs6861079	1.00[CHB][hapmap];0.88[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.82[MEX][hapmap];0.96[TSI][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7448416	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7710635	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7722972	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7727236	0.83[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68330600-68339000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:68332400-68338400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr5:68332400-68338800	Weak transcription	NHEK	skin
4	chr5:68333000-68338400	Weak transcription	K562	blood
5	chr5:68334800-68337400	Weak transcription	HepG2	liver

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