Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SMC3	chr5:68343807-68344526	SK-N-SH	brain:	n/a	chr5:68344201-68344215
2	RAD21	chr5:68343486-68344610	SK-N-SH	brain:	n/a	chr5:68344207-68344214 chr5:68344197-68344216

No.	Distal block	Cell Line	Cell type
1	chr5:68342410..68343964-chr5:68350073..68352627,2	K562	blood:
2	chr5:68320167..68322088-chr5:68342197..68344022,2	K562	blood:
3	chr5:68342981..68345897-chr5:68356534..68359095,2	K562	blood:
4	chr5:68342686..68345135-chr5:68627901..68629727,2	K562	blood:
5	chr5:68327990..68328493-chr5:68343712..68344547,2	MCF-7	breast:
6	chr5:68321118..68323616-chr5:68341647..68343951,2	MCF-7	breast:
7	chr5:68341693..68343908-chr5:68389795..68391335,2	K562	blood:
8	chr5:68343635..68345717-chr5:68626604..68629727,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10037187	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs149292	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1612772	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs164563	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1650777	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs182899	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1982773	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2260234	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2327641	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2434344	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2434345	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2450228	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2450234	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2637136	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2876310	0.91[ASN][1000 genomes]
rs6861079	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs7448416	0.91[ASN][1000 genomes]
rs7710635	0.93[ASN][1000 genomes]
rs7722972	0.93[ASN][1000 genomes]
rs7727236	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68339400-68345600	Weak transcription	HSMMtube	muscle
2	chr5:68339800-68344800	Weak transcription	HepG2	liver
3	chr5:68340000-68345600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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