Variant report

Variant	rs1628528
Chromosome Location	chr10:18513289-18513290
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1277744	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1277752	0.84[EUR][1000 genomes]
rs1277753	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1613804	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1631891	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1631911	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1757224	0.86[EUR][1000 genomes]
rs1779212	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1779213	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1779214	0.89[EUR][1000 genomes]
rs2250999	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2482109	0.92[ASN][1000 genomes]
rs2482111	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2489199	0.90[ASN][1000 genomes]
rs2489204	0.87[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18502400-18513600	Weak transcription	Right Ventricle	heart
2	chr10:18504800-18513400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr10:18505400-18513400	Weak transcription	Colon Smooth Muscle	Colon
4	chr10:18506200-18513600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr10:18506800-18513600	Weak transcription	Pancreas	Pancrea
6	chr10:18507000-18513600	Weak transcription	Ovary	ovary
7	chr10:18509800-18513600	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr10:18510200-18513600	Weak transcription	Stomach Smooth Muscle	stomach
9	chr10:18511200-18520400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr10:18511400-18516200	Weak transcription	Fetal Heart	heart
11	chr10:18512200-18513400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr10:18512400-18518400	Weak transcription	NHLF	lung
13	chr10:18513000-18513800	Weak transcription	Fetal Lung	lung
14	chr10:18513000-18514600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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