Variant report

Variant	rs16822460
Chromosome Location	chr2:182925651-182925652
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10497591	0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs10497592	0.82[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10497593	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822397	0.83[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822446	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs16822454	0.94[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822458	0.94[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2568683	1.00[CEU][hapmap]
rs2568684	1.00[CEU][hapmap]
rs2623421	1.00[CEU][hapmap]
rs58836112	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61711545	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6750153	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs7569843	1.00[AMR][1000 genomes]
rs7578135	1.00[AMR][1000 genomes]
rs7588817	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs7608147	1.00[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182903200-182928400	Weak transcription	Left Ventricle	heart
2	chr2:182918400-182928400	Weak transcription	Fetal Thymus	thymus
3	chr2:182918800-182937400	Weak transcription	Thymus	Thymus
4	chr2:182921200-182928800	Weak transcription	Fetal Heart	heart
5	chr2:182925600-182926400	Weak transcription	Liver	Liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links