Variant report

Variant	rs58836112
Chromosome Location	chr2:182922817-182922818
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10497591	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs10497592	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10497593	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822397	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822446	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs16822454	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822458	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16822460	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61711545	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6750153	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7569843	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7578135	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7588817	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7608147	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182903200-182928400	Weak transcription	Left Ventricle	heart
2	chr2:182918400-182928400	Weak transcription	Fetal Thymus	thymus
3	chr2:182918800-182937400	Weak transcription	Thymus	Thymus
4	chr2:182921200-182928800	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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