Variant report

Variant	rs16841983
Chromosome Location	chr1:197793267-197793268
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:197792235..197794878-chr1:197870530..197872568,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000203724	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1035320	1.00[ASN][1000 genomes]
rs10801618	1.00[ASN][1000 genomes]
rs10922312	1.00[ASN][1000 genomes]
rs10922325	1.00[JPT][hapmap]
rs11801596	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11803693	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11803984	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11804036	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11805085	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11805260	1.00[ASN][1000 genomes]
rs11806071	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11806604	1.00[ASN][1000 genomes]
rs11808449	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11810052	1.00[ASN][1000 genomes]
rs12062450	1.00[ASN][1000 genomes]
rs12079525	1.00[ASN][1000 genomes]
rs1362940	1.00[ASN][1000 genomes]
rs1421388	1.00[ASN][1000 genomes]
rs1421398	1.00[ASN][1000 genomes]
rs16841846	1.00[ASN][1000 genomes]
rs16841893	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16841969	1.00[ASN][1000 genomes]
rs1862011	1.00[ASN][1000 genomes]
rs2047541	1.00[ASN][1000 genomes]
rs2477069	0.92[YRI][hapmap];0.81[AFR][1000 genomes]
rs2488405	0.82[AFR][1000 genomes]
rs301505	1.00[ASN][1000 genomes]
rs34548547	0.80[AFR][1000 genomes]
rs35432263	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs41418447	1.00[ASN][1000 genomes]
rs4427436	1.00[ASN][1000 genomes]
rs4915243	1.00[ASN][1000 genomes]
rs4915244	1.00[ASN][1000 genomes]
rs6704186	0.81[AFR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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