The 2.0 version of rSNPBase

Variant report

Variant rs301505
Chromosome Location chr1:197598786-197598787
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197508400-197602400 Weak transcription Left Ventricle heart
2 chr1:197537400-197602200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:197541800-197602400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:197541800-197602600 Weak transcription Fetal Thymus thymus
5 chr1:197542000-197609000 Weak transcription Colonic Mucosa Colon
6 chr1:197542000-197626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:197544400-197602400 Weak transcription Primary B cells from cord blood blood
8 chr1:197547400-197602400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:197553000-197629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:197564800-197599200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:197564800-197599400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:197565000-197611600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:197578600-197611000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:197579000-197599000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr1:197579400-197599000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:197581000-197602600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:197583800-197599000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:197584800-197602600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:197586000-197609800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:197586400-197602000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:197586800-197599000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:197586800-197599000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:197587000-197599000 Weak transcription Primary T cells from cord blood blood
24 chr1:197587000-197602400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr1:197587000-197609800 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:197587200-197602400 Weak transcription Primary B cells from peripheral blood blood
27 chr1:197587400-197606600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:197587600-197599000 Weak transcription Dnd41 blood
29 chr1:197587600-197602400 Weak transcription Fetal Lung lung
30 chr1:197587600-197610800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:197588600-197602200 Weak transcription Fetal Heart heart
32 chr1:197590000-197613400 Weak transcription Stomach Mucosa stomach
33 chr1:197590200-197599000 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:197590400-197602600 Weak transcription Pancreas Pancrea
35 chr1:197591800-197599000 Weak transcription Duodenum Mucosa Duodenum
36 chr1:197591800-197610600 Weak transcription Fetal Intestine Large intestine
37 chr1:197593600-197628400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:197595200-197602400 Weak transcription Primary hematopoietic stem cells blood
39 chr1:197596600-197644800 Weak transcription Ovary ovary
40 chr1:197597200-197601800 Weak transcription Liver Liver
41 chr1:197597200-197602400 Weak transcription Colon Smooth Muscle Colon
42 chr1:197598000-197602400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:197598000-197602400 Weak transcription Thymus Thymus
44 chr1:197598000-197602600 Weak transcription Aorta Aorta
45 chr1:197598200-197602600 Weak transcription Esophagus oesophagus
46 chr1:197598200-197602600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015