The 2.0 version of rSNPBase

Variant report

Variant rs10801615
Chromosome Location chr1:197532686-197532687
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197478000-197541200 Weak transcription Aorta Aorta
2 chr1:197480000-197535800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:197480200-197541200 Weak transcription Esophagus oesophagus
4 chr1:197480200-197541200 Weak transcription Fetal Thymus thymus
5 chr1:197480400-197541200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:197487800-197536000 Weak transcription Fetal Lung lung
7 chr1:197502400-197534600 Weak transcription Fetal Intestine Large intestine
8 chr1:197503200-197541200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:197503600-197535800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr1:197505600-197541000 Weak transcription Pancreas Pancrea
11 chr1:197506400-197535800 Weak transcription Primary B cells from peripheral blood blood
12 chr1:197506600-197537600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:197506800-197535600 Weak transcription Primary B cells from cord blood blood
14 chr1:197506800-197564600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:197508400-197602400 Weak transcription Left Ventricle heart
16 chr1:197509200-197535600 Weak transcription Duodenum Mucosa Duodenum
17 chr1:197509200-197535600 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr1:197509400-197536000 Weak transcription Liver Liver
19 chr1:197511400-197535800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:197511800-197535600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:197513800-197535800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:197514200-197535800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr1:197514400-197535800 Weak transcription Primary monocytes fromperipheralblood blood
24 chr1:197522800-197535600 Weak transcription Dnd41 blood
25 chr1:197525400-197541200 Weak transcription Ovary ovary
26 chr1:197526800-197535000 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:197526800-197535800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:197526800-197563000 Weak transcription Osteobl bone
29 chr1:197527000-197535800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:197529200-197533600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:197529400-197533000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:197529600-197541400 Weak transcription Colonic Mucosa Colon
33 chr1:197529800-197536400 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:197529800-197548800 Weak transcription Right Ventricle heart
35 chr1:197530400-197536600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:197530800-197535800 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:197530800-197541200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:197531600-197533400 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr1:197531800-197533200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:197532200-197533200 Strong transcription Primary T cells from cord blood blood
41 chr1:197532400-197532800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
42 chr1:197532400-197533200 ZNF genes & repeats Primary hematopoietic stem cells blood
43 chr1:197532400-197535800 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:197532600-197536000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015