The 2.0 version of rSNPBase

Variant report

Variant rs4915244
Chromosome Location chr1:197588577-197588578
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197508400-197602400 Weak transcription Left Ventricle heart
2 chr1:197537400-197602200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:197541800-197602400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:197541800-197602600 Weak transcription Fetal Thymus thymus
5 chr1:197542000-197609000 Weak transcription Colonic Mucosa Colon
6 chr1:197542000-197626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:197544400-197602400 Weak transcription Primary B cells from cord blood blood
8 chr1:197547400-197602400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:197553000-197629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:197560200-197591400 Weak transcription Duodenum Mucosa Duodenum
11 chr1:197561400-197589800 Weak transcription Fetal Intestine Large intestine
12 chr1:197564800-197590000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:197564800-197599200 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:197564800-197599400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:197565000-197611600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:197569600-197590000 Weak transcription Pancreas Pancrea
17 chr1:197570200-197590000 Weak transcription Psoas Muscle Psoas
18 chr1:197578600-197611000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:197579000-197599000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:197579400-197599000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:197581000-197602600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:197583800-197599000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:197584800-197602600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:197585000-197590000 Enhancers Liver Liver
25 chr1:197586000-197609800 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr1:197586400-197594600 Weak transcription Primary hematopoietic stem cells blood
27 chr1:197586400-197602000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:197586800-197588600 Enhancers Fetal Heart heart
29 chr1:197586800-197590200 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr1:197586800-197599000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:197586800-197599000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:197587000-197599000 Weak transcription Primary T cells from cord blood blood
33 chr1:197587000-197602400 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:197587000-197609800 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:197587200-197602400 Weak transcription Primary B cells from peripheral blood blood
36 chr1:197587400-197594400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:197587400-197606600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr1:197587600-197591000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:197587600-197599000 Weak transcription Dnd41 blood
40 chr1:197587600-197602400 Weak transcription Fetal Lung lung
41 chr1:197587600-197610800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:197588200-197588600 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr1:197588400-197589000 Enhancers HUES48 Cell Line embryonic stem cell
44 chr1:197588400-197590000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:197588400-197590000 Enhancers HepG2 liver

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Last update: Aug 31, 2015