The 2.0 version of rSNPBase

Variant report

Variant rs6662893
Chromosome Location chr1:197504047-197504048
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197478000-197541200 Weak transcription Aorta Aorta
2 chr1:197480000-197535800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:197480200-197541200 Weak transcription Esophagus oesophagus
4 chr1:197480200-197541200 Weak transcription Fetal Thymus thymus
5 chr1:197480400-197541200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:197481000-197507000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:197481200-197504200 Weak transcription Duodenum Mucosa Duodenum
8 chr1:197481200-197507200 Weak transcription Dnd41 blood
9 chr1:197481200-197508000 Weak transcription Left Ventricle heart
10 chr1:197481200-197513400 Weak transcription Adipose Nuclei Adipose
11 chr1:197481400-197529600 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:197482000-197508000 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr1:197482000-197508000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:197482200-197507600 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:197482200-197507800 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr1:197487800-197536000 Weak transcription Fetal Lung lung
17 chr1:197491600-197520800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:197494600-197510200 Weak transcription Thymus Thymus
19 chr1:197495200-197510800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:197496200-197532400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:197500600-197529400 Weak transcription Primary hematopoietic stem cells blood
22 chr1:197502200-197508000 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:197502200-197531800 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:197502400-197534600 Weak transcription Fetal Intestine Large intestine
25 chr1:197503200-197510000 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:197503200-197524000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:197503200-197526400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:197503200-197541200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:197503400-197504600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:197503400-197505000 Strong transcription Primary T cells from cord blood blood
31 chr1:197503400-197510000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr1:197503600-197504400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:197503600-197505200 Strong transcription Rectal Mucosa Donor 31 rectum
34 chr1:197503600-197514400 Weak transcription Right Ventricle heart
35 chr1:197503600-197535800 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:197503800-197507600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:197504000-197504400 Enhancers Osteobl bone
38 chr1:197504000-197510400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015