Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10497957	0.86[JPT][hapmap]
rs11695985	1.00[CHB][hapmap];0.84[JPT][hapmap]
rs12997949	0.83[ASN][1000 genomes]
rs12998591	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13025703	0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs16847218	0.81[GIH][hapmap];0.84[ASN][1000 genomes]
rs16847357	0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs17414925	0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs2083297	0.86[JPT][hapmap]
rs2139936	0.81[ASN][1000 genomes]
rs2139937	0.84[ASN][1000 genomes]
rs2579980	0.83[CEU][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs34765931	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57175680	0.84[ASN][1000 genomes]
rs707283	0.86[JPT][hapmap]
rs839509	1.00[JPT][hapmap]
rs839511	0.86[JPT][hapmap]
rs839525	0.86[JPT][hapmap]
rs839526	0.81[ASN][1000 genomes]
rs839527	0.81[ASN][1000 genomes]
rs839528	0.83[ASN][1000 genomes]
rs839530	0.83[CEU][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.85[ASN][1000 genomes]
rs839536	0.83[ASN][1000 genomes]
rs957698	0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv834525	chr2:212693190-212860356	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212788400-212795000	Weak transcription	Fetal Heart	heart
2	chr2:212790000-212791400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr2:212790800-212792600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:212790800-212792800	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr2:212791000-212791800	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr2:212791000-212792800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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