Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10800212	1.00[TSI][hapmap]
rs12404396	1.00[AFR][1000 genomes]
rs12407378	1.00[AFR][1000 genomes]
rs12410486	1.00[AFR][1000 genomes]
rs12410779	1.00[AFR][1000 genomes]
rs1376660	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs1451605	0.89[EUR][1000 genomes]
rs1551178	0.89[EUR][1000 genomes]
rs16856624	1.00[AFR][1000 genomes]
rs16856639	1.00[ASW][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes]
rs16856659	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[MEX][hapmap];1.00[AFR][1000 genomes]
rs16856712	0.90[AMR][1000 genomes]
rs16857044	1.00[EUR][1000 genomes]
rs1901356	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1993106	1.00[AFR][1000 genomes]
rs2116525	0.89[EUR][1000 genomes]
rs4072243	1.00[AFR][1000 genomes]
rs4256790	0.89[EUR][1000 genomes]
rs4311866	0.89[EUR][1000 genomes]
rs4422983	1.00[EUR][1000 genomes]
rs6676350	1.00[TSI][hapmap]
rs7523055	0.81[MEX][hapmap]
rs966152	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs973381	0.81[MEX][hapmap];1.00[TSI][hapmap]
rs987131	0.86[MEX][hapmap];1.00[TSI][hapmap]
rs9970008	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916491	chr1:166000783-166948513	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	esv3332610	chr1:166111288-166282689	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:166264800-166265200	Enhancers	Skeletal Muscle Female	skeletal muscle

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