The 2.0 version of rSNPBase

Variant report

Variant rs16865202
Chromosome Location chr2:178267979-178267980
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178258400-178272600 Weak transcription Primary T cells fromperipheralblood blood
2 chr2:178258800-178277200 Weak transcription Right Ventricle heart
3 chr2:178258800-178285000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:178258800-178294200 Weak transcription Thymus Thymus
5 chr2:178259000-178269000 Weak transcription Fetal Lung lung
6 chr2:178259800-178271200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:178260200-178268800 Weak transcription Brain Hippocampus Middle brain
8 chr2:178260200-178269600 Weak transcription Brain Anterior Caudate brain
9 chr2:178260200-178270200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:178260200-178272800 Weak transcription Primary B cells from peripheral blood blood
11 chr2:178260200-178280200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr2:178260400-178272600 Weak transcription Primary B cells from cord blood blood
13 chr2:178260400-178285600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:178261400-178269000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:178262000-178269800 Weak transcription Psoas Muscle Psoas
16 chr2:178262800-178268800 Weak transcription Gastric stomach
17 chr2:178262800-178271600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:178262800-178272800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr2:178262800-178279200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:178263000-178268000 Weak transcription Rectal Smooth Muscle rectum
21 chr2:178263000-178268000 Weak transcription NHEK skin
22 chr2:178263000-178268400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr2:178263200-178268200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:178263200-178268200 Weak transcription NHDF-Ad bronchial
25 chr2:178263200-178275400 Weak transcription Brain Substantia Nigra brain
26 chr2:178263400-178269000 Weak transcription HMEC breast
27 chr2:178263400-178291800 Weak transcription Duodenum Mucosa Duodenum
28 chr2:178263600-178269800 Weak transcription Fetal Intestine Small intestine
29 chr2:178263800-178268600 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr2:178263800-178269000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:178264000-178273200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:178264200-178282800 Weak transcription Dnd41 blood
33 chr2:178264200-178291600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:178264400-178268800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr2:178264400-178269400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr2:178264400-178271600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr2:178264400-178272200 Weak transcription Left Ventricle heart
38 chr2:178264400-178280400 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr2:178264600-178268200 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr2:178264600-178269800 Weak transcription Small Intestine intestine
41 chr2:178264600-178270800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr2:178264800-178269800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr2:178265400-178269000 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr2:178265400-178271800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:178265600-178268400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr2:178265600-178268400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr2:178265600-178273200 Weak transcription HSMMtube muscle
48 chr2:178265600-178287000 Weak transcription K562 blood
49 chr2:178265800-178268000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:178265800-178268400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015