The 2.0 version of rSNPBase

Variant report

Variant rs16865338
Chromosome Location chr2:178405014-178405015
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178335000-178410600 Weak transcription Thymus Thymus
2 chr2:178349800-178407800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr2:178350000-178407000 Weak transcription Osteobl bone
4 chr2:178356000-178405400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:178358600-178406000 Weak transcription Ovary ovary
6 chr2:178358600-178417000 Weak transcription Aorta Aorta
7 chr2:178360600-178405400 Weak transcription NH-A brain
8 chr2:178364400-178416600 Weak transcription Esophagus oesophagus
9 chr2:178372600-178405400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr2:178372800-178416600 Weak transcription A549 lung
11 chr2:178375600-178413800 Weak transcription K562 blood
12 chr2:178376200-178407800 Weak transcription Left Ventricle heart
13 chr2:178376200-178416600 Weak transcription Pancreas Pancrea
14 chr2:178376600-178407600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr2:178378400-178410000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr2:178379600-178407600 Weak transcription Fetal Kidney kidney
17 chr2:178379800-178406000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:178386000-178407400 Weak transcription HSMMtube muscle
19 chr2:178386800-178405400 Weak transcription Primary B cells from peripheral blood blood
20 chr2:178388600-178416600 Weak transcription Muscle Satellite Cultured Cells --
21 chr2:178388800-178405400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr2:178389000-178405200 Weak transcription Fetal Intestine Large intestine
23 chr2:178389000-178407800 Weak transcription Fetal Muscle Trunk muscle
24 chr2:178389000-178408200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:178389000-178416800 Weak transcription Small Intestine intestine
26 chr2:178389200-178406000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:178389200-178416600 Weak transcription Duodenum Mucosa Duodenum
28 chr2:178389800-178406800 Weak transcription Primary T cells fromperipheralblood blood
29 chr2:178389800-178407600 Weak transcription Adipose Nuclei Adipose
30 chr2:178389800-178410200 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr2:178389800-178416800 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr2:178390600-178416600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr2:178390800-178407400 Weak transcription Fetal Stomach stomach
34 chr2:178391000-178413400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr2:178391200-178406000 Weak transcription Fetal Thymus thymus
36 chr2:178391400-178407200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr2:178391800-178408000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:178392000-178416800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:178397600-178410600 Weak transcription Primary hematopoietic stem cells blood
40 chr2:178401000-178416600 Weak transcription Lung lung
41 chr2:178401800-178407400 Weak transcription Brain Germinal Matrix brain
42 chr2:178402400-178405400 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr2:178402600-178405400 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr2:178402600-178406200 Strong transcription Primary monocytes fromperipheralblood blood
45 chr2:178402800-178416600 Weak transcription Stomach Smooth Muscle stomach
46 chr2:178403000-178405400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr2:178403400-178407400 Weak transcription NHDF-Ad bronchial
48 chr2:178403400-178410400 Weak transcription Primary B cells from cord blood blood
49 chr2:178403600-178407400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:178403600-178408200 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015