The 2.0 version of rSNPBase

Variant report

Variant rs16865224
Chromosome Location chr2:178281224-178281225
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178258800-178285000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:178258800-178294200 Weak transcription Thymus Thymus
3 chr2:178260400-178285600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr2:178263400-178291800 Weak transcription Duodenum Mucosa Duodenum
5 chr2:178264200-178282800 Weak transcription Dnd41 blood
6 chr2:178264200-178291600 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr2:178265600-178287000 Weak transcription K562 blood
8 chr2:178269200-178283000 Weak transcription HSMM muscle
9 chr2:178269200-178283000 Weak transcription Osteobl bone
10 chr2:178270400-178294400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:178271800-178291600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr2:178272400-178285600 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr2:178272800-178295200 Weak transcription Left Ventricle heart
14 chr2:178273000-178288800 Weak transcription GM12878-XiMat blood
15 chr2:178273400-178286600 Weak transcription HSMMtube muscle
16 chr2:178273400-178288600 Weak transcription Primary T cells from cord blood blood
17 chr2:178274400-178282800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr2:178274600-178291800 Weak transcription Primary B cells from cord blood blood
19 chr2:178276400-178291400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr2:178276800-178289800 Weak transcription Fetal Intestine Large intestine
21 chr2:178276800-178294400 Weak transcription Psoas Muscle Psoas
22 chr2:178277400-178291800 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr2:178278000-178285400 Weak transcription Primary hematopoietic stem cells blood
24 chr2:178278200-178285000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr2:178278600-178282800 Weak transcription A549 lung
26 chr2:178278800-178282600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:178278800-178282800 Weak transcription NHEK skin
28 chr2:178278800-178283000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr2:178278800-178283600 Weak transcription HMEC breast
30 chr2:178279200-178283600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:178279600-178294400 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr2:178279800-178281400 Enhancers Primary neutrophils fromperipheralblood blood
33 chr2:178279800-178284200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:178280000-178281400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr2:178280200-178282800 Weak transcription Fetal Lung lung
36 chr2:178280200-178291600 Weak transcription Primary T cells fromperipheralblood blood
37 chr2:178280400-178296000 Weak transcription Small Intestine intestine
38 chr2:178280600-178283000 Weak transcription Hela-S3 cervix
39 chr2:178280800-178281400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:178280800-178284600 Enhancers Colon Smooth Muscle Colon
41 chr2:178280800-178294400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr2:178281000-178281800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:178281000-178282800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:178281000-178282800 Weak transcription Adipose Nuclei Adipose
45 chr2:178281000-178285000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr2:178281200-178281800 Enhancers HepG2 liver
47 chr2:178281200-178282200 Weak transcription HUVEC blood vessel
48 chr2:178281200-178283000 Weak transcription Brain Hippocampus Middle brain
49 chr2:178281200-178283800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr2:178281200-178284000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015