Variant report

Variant	rs16870764
Chromosome Location	chr5:41063013-41063014
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10512759	0.86[AFR][1000 genomes]
rs1423415	0.86[AFR][1000 genomes]
rs1423416	0.86[AFR][1000 genomes]
rs56192818	0.86[AFR][1000 genomes]
rs57772697	0.86[AFR][1000 genomes]
rs58130855	0.97[AFR][1000 genomes]
rs59337747	0.86[AFR][1000 genomes]
rs60122677	0.86[AFR][1000 genomes]
rs60970695	0.86[AFR][1000 genomes]
rs60991951	0.97[AFR][1000 genomes]
rs6451562	0.97[AFR][1000 genomes]
rs6451564	0.86[AFR][1000 genomes]
rs6863074	0.86[AFR][1000 genomes]
rs6867676	0.86[AFR][1000 genomes]
rs6880310	0.86[AFR][1000 genomes]
rs6880316	0.86[AFR][1000 genomes]
rs6884328	0.86[AFR][1000 genomes]
rs6884665	0.86[AFR][1000 genomes]
rs6888861	0.87[AFR][1000 genomes]
rs6897308	0.97[AFR][1000 genomes]
rs6898868	0.97[AFR][1000 genomes]
rs731705	0.86[AFR][1000 genomes]
rs73750244	0.99[AFR][1000 genomes]
rs73750245	0.99[AFR][1000 genomes]
rs73750248	0.97[AFR][1000 genomes]
rs73750249	0.97[AFR][1000 genomes]
rs73750253	0.86[AFR][1000 genomes]
rs73750255	0.86[AFR][1000 genomes]
rs73750257	0.86[AFR][1000 genomes]
rs73750258	0.86[AFR][1000 genomes]
rs73750259	0.86[AFR][1000 genomes]
rs73750264	0.86[AFR][1000 genomes]
rs73750266	0.86[AFR][1000 genomes]
rs73750267	0.86[AFR][1000 genomes]
rs73750268	0.86[AFR][1000 genomes]
rs73750287	0.86[AFR][1000 genomes]
rs7707176	0.86[AFR][1000 genomes]
rs7707908	0.86[AFR][1000 genomes]
rs7708113	0.86[AFR][1000 genomes]
rs7711400	0.86[AFR][1000 genomes]
rs7722913	0.83[AFR][1000 genomes]
rs7723054	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830268	chr5:40897361-41138366	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links