Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr8:104927395-104927644	HepG2	liver:	n/a	chr8:104927479-104927490 chr8:104927478-104927491

Variant related genes	Relation type
RIMS2	TF binding region

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10091132	0.97[EUR][1000 genomes]
rs10099292	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10505051	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12156137	0.93[EUR][1000 genomes]
rs12677553	0.84[ASN][1000 genomes]
rs12678453	0.84[ASN][1000 genomes]
rs12678653	0.86[ASN][1000 genomes]
rs16870704	0.84[ASN][1000 genomes]
rs16870797	0.94[ASN][1000 genomes]
rs16870817	0.94[ASN][1000 genomes]
rs16870822	0.91[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs16870841	0.92[ASN][1000 genomes]
rs16870847	0.92[ASN][1000 genomes]
rs17816538	0.97[EUR][1000 genomes]
rs17854256	0.94[ASN][1000 genomes]
rs17854257	0.92[ASN][1000 genomes]
rs2023031	0.92[ASN][1000 genomes]
rs28569274	0.97[EUR][1000 genomes]
rs28572253	0.97[EUR][1000 genomes]
rs4531015	0.92[ASN][1000 genomes]
rs4734741	0.88[EUR][1000 genomes]
rs73697700	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73699003	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73699004	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752692	chr8:104520824-105123824	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1016387	chr8:104578389-104931853	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1031195	chr8:104601231-105194208	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
4	nsv831415	chr8:104907757-105115320	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104899400-104933400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:104919600-104938600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:104924200-104938600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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