Variant report

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10087617	0.89[AFR][1000 genomes]
rs10088414	0.89[AFR][1000 genomes]
rs10088886	0.89[AFR][1000 genomes]
rs10089984	0.89[AFR][1000 genomes]
rs10090513	0.89[AFR][1000 genomes]
rs10091132	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10093565	0.89[AFR][1000 genomes]
rs10093589	0.89[AFR][1000 genomes]
rs10095442	0.89[AFR][1000 genomes]
rs10096578	0.89[AFR][1000 genomes]
rs10097302	0.89[AFR][1000 genomes]
rs10097620	0.89[AFR][1000 genomes]
rs10099292	1.00[EUR][1000 genomes]
rs10100425	0.84[AFR][1000 genomes]
rs10104636	0.89[AFR][1000 genomes]
rs10107602	0.89[AFR][1000 genomes]
rs10108442	0.89[AFR][1000 genomes]
rs10111252	0.89[AFR][1000 genomes]
rs10505051	1.00[EUR][1000 genomes]
rs12156137	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1521064	0.89[AFR][1000 genomes]
rs16870826	0.97[EUR][1000 genomes]
rs1895896	0.89[AFR][1000 genomes]
rs28538941	0.89[AFR][1000 genomes]
rs28569274	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28572253	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28576535	0.89[AFR][1000 genomes]
rs28667874	0.89[AFR][1000 genomes]
rs28697136	0.89[AFR][1000 genomes]
rs28716856	0.89[AFR][1000 genomes]
rs28782537	0.89[AFR][1000 genomes]
rs28840419	0.89[AFR][1000 genomes]
rs28872263	0.89[AFR][1000 genomes]
rs28884544	0.95[AFR][1000 genomes]
rs4734741	0.91[EUR][1000 genomes]
rs73697700	1.00[EUR][1000 genomes]
rs73699003	0.97[EUR][1000 genomes]
rs73699004	0.97[EUR][1000 genomes]
rs9656859	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752692	chr8:104520824-105123824	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1016387	chr8:104578389-104931853	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1031195	chr8:104601231-105194208	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
4	nsv831415	chr8:104907757-105115320	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104899400-104933400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:104914800-104926000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr8:104919600-104938600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:104924200-104938600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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