Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10264038	0.82[GIH][hapmap]
rs10499444	0.86[CHB][hapmap];0.91[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10950529	0.87[AFR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12531250	0.93[CHD][hapmap];0.93[GIH][hapmap];0.86[JPT][hapmap]
rs12533779	0.82[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.90[TSI][hapmap];0.87[YRI][hapmap];0.97[AFR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12537806	0.87[EUR][1000 genomes]
rs12540039	0.81[EUR][1000 genomes]
rs12669027	0.86[CHB][hapmap];0.90[CHD][hapmap];0.81[JPT][hapmap]
rs16878172	0.86[GIH][hapmap]
rs17168201	0.86[GIH][hapmap]
rs17168243	0.82[GIH][hapmap];0.88[TSI][hapmap]
rs1821099	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1991687	0.82[TSI][hapmap]
rs61207348	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61487234	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62443470	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62443471	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73679788	0.81[EUR][1000 genomes]
rs73679795	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7786503	0.86[CHB][hapmap];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1848567	chr7:14464118-14579801	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv887707	chr7:14471682-14576163	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv887708	chr7:14494508-14617982	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv1800100	chr7:14511454-14564068	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14520400-14542400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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