Variant report

Variant	rs16884592
Chromosome Location	chr8:35916564-35916565
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs16884692	1.00[AMR][1000 genomes]
rs2464379	0.82[AFR][1000 genomes]
rs2702489	0.82[AFR][1000 genomes]
rs2843913	0.82[AFR][1000 genomes]
rs2843927	0.82[AFR][1000 genomes]
rs35923851	0.92[AFR][1000 genomes]
rs58229087	1.00[AMR][1000 genomes]
rs663526	1.00[AMR][1000 genomes]
rs676954	1.00[AMR][1000 genomes]
rs73582508	0.82[AFR][1000 genomes]
rs73582519	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73584521	1.00[AMR][1000 genomes]
rs73586320	1.00[AMR][1000 genomes]
rs73586325	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv831286	chr8:35802388-35950586	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35913600-35919600	Enhancers	Muscle Satellite Cultured Cells	--
2	chr8:35914600-35917400	Enhancers	Osteobl	bone
3	chr8:35914600-35917800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr8:35916000-35916800	Enhancers	HMEC	breast
5	chr8:35916000-35919600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr8:35916200-35916600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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