Variant report

Variant rs1688766
Chromosome Location chr3:99647850-99647851
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99604600-99648200 Weak transcription Primary T cells from cord blood blood
2 chr3:99640000-99648400 Weak transcription HSMMtube muscle
3 chr3:99640200-99648400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:99640200-99648400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr3:99640400-99648400 Weak transcription Gastric stomach
6 chr3:99640400-99648600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr3:99640400-99656000 Weak transcription GM12878-XiMat blood
8 chr3:99640400-99656600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr3:99640400-99656800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr3:99641000-99648200 Weak transcription Psoas Muscle Psoas
11 chr3:99641200-99648400 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr3:99641400-99654200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr3:99642200-99654000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr3:99644000-99649800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr3:99644400-99648400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr3:99644400-99648400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:99644800-99648000 Weak transcription Left Ventricle heart
18 chr3:99644800-99648000 Weak transcription Right Ventricle heart
19 chr3:99644800-99648200 Weak transcription Brain Anterior Caudate brain
20 chr3:99644800-99648400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr3:99644800-99648400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr3:99644800-99648400 Weak transcription Brain Hippocampus Middle brain
23 chr3:99644800-99648400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr3:99644800-99648400 Weak transcription Brain Substantia Nigra brain
25 chr3:99644800-99648400 Weak transcription A549 lung
26 chr3:99644800-99648600 Weak transcription Lung lung
27 chr3:99644800-99648800 Weak transcription Brain Germinal Matrix brain
28 chr3:99644800-99649600 Weak transcription Pancreas Pancrea
29 chr3:99644800-99653800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr3:99644800-99663200 Weak transcription Esophagus oesophagus
31 chr3:99645000-99648000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr3:99645000-99648400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr3:99645000-99648400 Weak transcription HSMM muscle
34 chr3:99645200-99648200 Weak transcription HMEC breast
35 chr3:99645200-99648200 Weak transcription Osteobl bone
36 chr3:99645200-99648400 Weak transcription Aorta Aorta
37 chr3:99645200-99648400 Weak transcription Brain Cingulate Gyrus brain
38 chr3:99645200-99648400 Weak transcription Fetal Lung lung
39 chr3:99645200-99648400 Weak transcription NH-A brain
40 chr3:99645200-99648600 Weak transcription Fetal Intestine Small intestine
41 chr3:99645200-99653800 Weak transcription NHLF lung
42 chr3:99645200-99654200 Weak transcription Small Intestine intestine
43 chr3:99645200-99656800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr3:99645400-99648400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr3:99645400-99648400 Weak transcription Muscle Satellite Cultured Cells --
46 chr3:99645400-99648400 Weak transcription Brain Angular Gyrus brain
47 chr3:99645400-99648400 Weak transcription HepG2 liver
48 chr3:99645400-99653800 Weak transcription NHDF-Ad bronchial
49 chr3:99646000-99653400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:99646000-99656400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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